Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq22701 104 2e-17 >seq22701 Length=2303 Score = 104 bits (114), Expect = 2e-17 Identities = 331/512 (65%), Gaps = 6/512 (1%) Strand=Plus/Plus Query 29878 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 29937 || ||||| |||||| | || | ||| | || || || ||||| || || || || Sbjct 604 ACATGAGCAATCATGCATGTCAAGAGCGCATAAGATGCAATATTAAACGGCACACCCAGG 663 Query 29938 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAAC 29997 |||||||| | || | || || | |||||||| | ||| || | ||| || ||| Sbjct 664 CCCATGTCGGCAGATCGTTGATACATTTGACACGATAACTCCCCATTTGCCACATAGAAC 723 Query 29998 TG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAG 30054 || | ||||| ||||| || ||||||||||| | | || || ||||| Sbjct 724 TGTGCAAACATG---TGGCATGGTGGAAGAGCCATTAATTTAAGATCAGATGGATTCCAT 780 Query 30055 GCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGC 30114 || | | ||||||||| | || || || || | | | || | | | | | Sbjct 781 GCTGAGAGGATGATGCGTCGATCATCGGGATTATGCTTTATCTTATTAATAACATCTAAA 840 Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30174 |||||||| | || || |||||||| | ||||| || |||| ||| || || Sbjct 841 AGCTGATCAAATCCTTGGCCGGAGTAGTCCTCATGCATGTTAGTATACTTTGCACCAAAG 900 Query 30175 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30234 ||||||||||| ||||| || || ||||| | ||| ||||| ||||| | | || || Sbjct 901 TGCCTCCACTGAAACCCATAAACAGGTCCTAAGTCACCCTCCTCCCTTTCTTTCAAACCA 960 Query 30235 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 30294 | | || | | ||||| || | || ||||||| || | | || || || Sbjct 961 ATGCTATCAAGGTATTCTCTCGATGCATTTCCGTCCCATATATGAATGCCTTTTTCCTGT 1020 Query 30295 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTC 30354 | | | ||| ||||| || || |||| ||||| || ||||| || || || | | Sbjct 1021 AACACCATGGCATTTGTTGAGCCACTGATAAACCAAAGAAGCTCTTCAACAACCCCGCGC 1080 Query 30355 CAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386 ||||| || ||||| || || || || ||||| Sbjct 1081 CAAAATACTCTCTTAGTTGTTAGAAGCGGAAA 1112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408245796164207