Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq63568 531 6e-146 >seq63568 Length=1222 Score = 531 bits (588), Expect = 6e-146 Identities = 710/986 (72%), Gaps = 6/986 (1%) Strand=Plus/Minus Query 162502 TGTAACTGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATG 162561 ||||||||| | ||| ||| || || | || | || ||||| ||||| |||||| Sbjct 1080 TGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATG 1021 Query 162562 ATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCA 162621 |||||| ||| | | ||| | || || || || || |||||||| || |||||| Sbjct 1020 ATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCA 961 Query 162622 GTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATC 162681 || ||||| |||||||| | || |||||| | || || || || || || ||||| || Sbjct 960 GTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATT 901 Query 162682 ATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGG 162741 || |||||||| | |||||| ||| ||||| ||| | ||||| || || || ||| Sbjct 900 ATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGG 841 Query 162742 GAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTC 162801 ||||| ||| | ||||||| ||||| || |||||||| |||| |||| | || | Sbjct 840 GAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTTCTA 781 Query 162802 CACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTA 162861 |||||| | | || | | ||| |||||| ||||||||||| || || | Sbjct 780 CACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTG 721 Query 162862 GGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTG 162921 |||||||| |||||||| ||||||||| || || || || | || || || || Sbjct 720 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCCGTCGCAGCTGCTACTGCAGTT 661 Query 162922 TTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCT 162981 |||||| |||| || | |||||||| || || || | |||||||| || || ||| Sbjct 660 TTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCT 601 Query 162982 GGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTC 163041 |||||||| |||| ||| | || || || || ||||| || || || |||||||| || Sbjct 600 GGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCACCCATTT 541 Query 163042 CATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCT 163101 || ||| | || || || ||||||||||| || || || || ||||||||||||||||| Sbjct 540 CACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCC 481 Query 163102 CTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTAT 163161 | || |||||| | | ||||| ||||| || || | || || || | ||||| Sbjct 480 TTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTAC 421 Query 163162 AAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGC 163221 | ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| || Sbjct 420 AGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCACGGTTATTTTGGCCGA 361 Query 163222 TTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCA 163281 ||||||||||| ||||| ||||||||| || || || | || |||||||| ||||| Sbjct 360 TTGATCTTCCAATATGCTAGTTTCAACAATTCTCGCTCTTTACATTTCTTCCTAGCTGCT 301 Query 163282 TTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTT 163341 | ||||| || | |||||||| || || | ||| | |||||||| ||||| | Sbjct 300 TGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAATTTA 241 Query 163342 AACGGTTTCAACTTCAACCAATCCGTCGTTGA---CGCAGGTGGTAAAGTGATTCCTACT 163398 || |||||||| || |||||||| || ||||| |||| || || ||| ||| Sbjct 240 AATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGT---GTAATTAATACC 184 Query 163399 TGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCT 163458 ||||| ||||| ||||| | || |||||||||||||||||||| || ||||||||| Sbjct 183 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 124 Query 163459 CACAACTTCCCACTTGACCTTGCTGC 163484 || || ||||| || ||||| ||||| Sbjct 123 CATAATTTCCCTCTAGACCTAGCTGC 98 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552568640523960