Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_019487.1 Length=143986 Score E Sequences producing significant alignments: (Bits) Value seq18667 84.2 2e-11 seq18665 84.2 2e-11 >seq18667 Length=1573 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 122181 ATCGTAGAGGTCTATGGACCAGAGTCTAATGGTAAAACCACTGTAGCGCTACATGCTATT 122240 || |||||| | | ||||||||| | ||| |||||||| |||| || ||||||||| Sbjct 442 ATTGTAGAGATATTTGGACCAGAAAGCAGTGGGAAAACCACCTTAGCACTTCATGCTATT 501 Query 122241 GCTGAAGTTCAAAAGATAGGTGGAATTGCTATCTTTTTAGATACTGAACACGCGCTAGAT 122300 || ||||| || ||| |||| |||| ||| || || ||||| | || ||||| | ||| Sbjct 502 GCAGAAGTACAGAAGTTAGGAGGAAATGCAATGCTTGTAGATGCAGAGCACGCTTTTGAT 561 Query 122301 C 122301 | Sbjct 562 C 562 >seq18665 Length=1254 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 122181 ATCGTAGAGGTCTATGGACCAGAGTCTAATGGTAAAACCACTGTAGCGCTACATGCTATT 122240 || |||||| | | ||||||||| | ||| |||||||| |||| || ||||||||| Sbjct 123 ATTGTAGAGATATTTGGACCAGAAAGCAGTGGGAAAACCACCTTAGCACTTCATGCTATT 182 Query 122241 GCTGAAGTTCAAAAGATAGGTGGAATTGCTATCTTTTTAGATACTGAACACGCGCTAGAT 122300 || ||||| || ||| |||| |||| ||| || || ||||| | || ||||| | ||| Sbjct 183 GCAGAAGTACAGAAGTTAGGAGGAAATGCAATGCTTGTAGATGCAGAGCACGCTTTTGAT 242 Query 122301 C 122301 | Sbjct 243 C 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460197325423440