Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq25475 140 6e-28 >seq25475 Length=2349 Score = 140 bits (154), Expect = 6e-28 Identities = 356/537 (66%), Gaps = 11/537 (2%) Strand=Plus/Plus Query 48152 CCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGT 48211 |||||||| || || ||| |||| || || | || ||||| | || | | | Sbjct 1554 CCTTCGTCGCGTGAAATAAGCTCGTTTGAAAAAGTTAATCCTGGCATTAAACCGCGTTTT 1613 Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAAC 48271 |||||||||||||| || |||| || || || || || || || || || || Sbjct 1614 TTGAGCCAGAAAATCGCACAGAAACTACCTGAAAAAAATATACCTTCAACGCAAGCAAAT 1673 Query 48272 GCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCT 48331 || | |||||| |||| | | | | || |||||| | |||||| || Sbjct 1674 GCTACAATCCTCTCAGCGAATGTATCAGACGAATC---GATCCATTTCATCGCCCATTCC 1730 Query 48332 GCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTCA 48388 ||||| ||| || ||||| |||||||| || || | || | | ||||| ||| Sbjct 1731 GCCTTTTTCGCAATACATGGAATCGTCTCAATCGCGTGAAACAAACGATTCTT---CTCT 1787 Query 48389 CCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCT 48448 ||| || | ||| | ||| || | |||||||| || || | |||||| Sbjct 1788 GCTGAATCTTTGATATACGCCTCGAGGAGAAGAGAATACATCTCTGAATGGATATTCTCG 1847 Query 48449 ATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAAT 48508 || ||||||||||| ||||||||||| | ||||| | | || | |||| | |||| Sbjct 1848 ATTGCGATCTGGAATCCGTAGAAGGCACGCGCCTCTGAGATTTGGATTTCTTTCATGAAT 1907 Query 48509 CTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATG 48567 || ||| || |||||||| ||| || || || || || |||||||||||||||||||| Sbjct 1908 CT-TCCGGCGAGATTCTCCAAGACGATTCCGTCGGAGGCGGCAAAGAAGGCAAGGACATG 1966 Query 48568 TTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAG 48627 || || |||||||| || |||||| | ||||| ||| |||| | || Sbjct 1967 CGAAACAAAGTGGCGCTCACCGTCGGTGAGGGAGATCCAGTGCTGGTTATCTTGGGAGAG 2026 Query 48628 GTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 || |||||||| | |||||||| || || ||||| |||||||| |||| || Sbjct 2027 ATCGACTTCTTCGGCGGTCCAGAAAGAGGCTTCGGCTTTCTTGTACATTTCCCAGAT 2083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930663458658560