Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq25475 89.7 1e-12 >seq25475 Length=2349 Score = 89.7 bits (98), Expect = 1e-12 Identities = 364/567 (64%), Gaps = 9/567 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||| ||||||||||| || || ||| ||||||||||||||| | ||||| Sbjct 2083 ATCTGGGAAATGTACAAGAAAGCCGAAGCCTCTTTCTGGACCGCCGAAGAAGTCGATCTC 2024 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 || | || | | |||| | | || || | | |||| || ||| | | | Sbjct 2023 TCCCAAGATAACCAGCACTGGATCTCCCTCACCGACGGTGAGCGCCACTTTGTTTCGCAT 1964 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || | || |||||||| ||||| || || || || |||||||| || |||||| Sbjct 1963 GTCCTTGCCTTCTTTGCCGCCTCCGACGGAATCGTCTTGGAGAATCTCGCCGGAAGATTC 1904 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTG-TTTCTACGGTTTCCAGATGGCCATCGA 25715 | | ||| | || | |||| | ||| |||||||| |||||||| || ||||| Sbjct 1903 ATGAAAGAAATCCAAATCTCAGAGG-CGCGTGCCTTCTACGGATTCCAGATCGCAATCGA 1845 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCGA 25775 ||| | || || ||| ||||| | || || | |||| || | ||| || || Sbjct 1844 GAATATCCATTCAGAGATGTATTCTCTTCTCCTCGAGGCGTATATCAAAGATTCAGCAGA 1785 Query 25776 GAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTG 25835 || |||| ||||| || || ||| || || | || || |||||| || Sbjct 1784 GAAGAATCGTTTGTTTCACGCGATTGAGACGATTCCATGTATTGCGAAAAAGGCGGAATG 1725 Query 25836 GGCCATGAAGTGGATC-AACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894 ||| ||||| |||||| | | | || ||| || | ||| || | ||||| |||| Sbjct 1724 GGCGATGAAATGGATCGATTCGTCTGA----TACATTCGCTGAGAGGATTGTAGCATTTG 1669 Query 25895 CTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG-GCCATCTTCTGGCTCAAGCAG 25953 || || || || || ||||| | | | |||| | || || ||||||||||| | Sbjct 1668 CTTGCGTTGAAGGTATATTTTT-TTCAGGTAGTTTCTGTGCGATTTTCTGGCTCAAAAAA 1610 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 || ||||| || | ||||| |||||||| || | ||||| ||||| Sbjct 1609 CGCGGTTTAATGCCAGGATTAACTTTTTCAAACGAGCTTATTTCACGCGACGAAGGTCTT 1550 Query 26014 CACAGAGATTTTGCCTGCCTGCTCTAC 26040 || | ||||| || || |||| ||| Sbjct 1549 CATTGCGATTTCGCTTGTTTGCTTTAC 1523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927977967200960