Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq63568 592 2e-164 seq67767 145 8e-30 seq65592 136 4e-27 seq70055 98.7 1e-15 >seq63568 Length=1222 Score = 592 bits (656), Expect = 2e-164 Identities = 700/945 (74%), Gaps = 2/945 (0%) Strand=Plus/Minus Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348 || |||||||| ||| | |||||||| ||| || ||| |||| || | || |||| Sbjct 1041 GGATGGTTTGGTGTTTTGATGATCCCTACC-TTATTGACCGCAACTTCTGTATTTATTAT 983 Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408 ||| ||| ||||||| ||||| || || || || || || || || || ||| ||||||| Sbjct 982 CGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATC 923 Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468 ||| | ||||| ||||| || || |||||||| || |||| | ||| || || || Sbjct 922 TCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGG 863 Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528 | ||||| ||||| || |||||||| || || ||||||| ||| | ||||| ||||| Sbjct 862 TTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGG 803 Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGA 8588 |||||| | || | ||| | |||||| | ||||| || | ||| ||||||||||| Sbjct 802 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGA 743 Query 8589 ATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCC 8648 ||||||||| || || || || ||||| |||||||| ||||||||| || ||||| Sbjct 742 GTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCC 683 Query 8649 TGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGA 8708 || || |||||| |||| || ||| | |||| || |||||||||| || || || Sbjct 682 CGTCGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGA 623 Query 8709 TGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCA 8768 |||||||||||| || ||||| ||||| ||||||| |||| |||| || ||||||||||| Sbjct 622 TGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCA 563 Query 8769 CAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCT 8828 || || || |||||||| || |||||| | ||||| |||||||| |||||||| || || Sbjct 562 TAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCT 503 Query 8829 CTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAC 8888 || || ||||| ||||| | || |||||| || | | || ||||| |||| Sbjct 502 ATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAA 443 Query 8889 CGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGC 8948 || ||| || | || |||| ||||||||||| || ||||| || || ||||| || Sbjct 442 TGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGC 383 Query 8949 CGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAG 9008 ||||| || || ||||| || ||||||||||||||||| ||| ||||||||| | Sbjct 382 TGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGCTC 323 Query 9009 CTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGT 9068 || ||||||||||| ||||| |||||||| || || |||||||||||||| | || | Sbjct 322 TTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTAT 263 Query 9069 CTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACA 9128 | || ||||||||||| | ||||| ||||| || ||||| || | | || | || Sbjct 262 CAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCA 203 Query 9129 AGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGT 9188 ||| || || | || |||||||| || | ||||||| || || ||||||||||| Sbjct 202 AGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGT 143 Query 9189 CATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGC 9233 ||||| ||| | || || || || ||||| || ||||| || || Sbjct 142 TATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGCTGC 98 >seq67767 Length=213 Score = 145 bits (160), Expect = 8e-30 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 10068 GAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAG 10127 ||||||| ||| ||| || | || || || ||| ||||||| || || ||||| | Sbjct 1 GAGATTTTACCCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTG 60 Query 10128 CCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGATTAATTGGAATCC 10187 | |||| ||||| || ||||||||||| || ||||| || || ||| || | | | Sbjct 61 CTTTCGGATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGC 120 Query 10188 GACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCA 10247 | ||||| ||||| ||||| || || || || |||||||||||||| ||| ||||| | Sbjct 121 GGCCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTGA 180 Query 10248 TCTATCCACTCGGACAGTCTAGTTGGTTCTTTG 10280 | |||||||| || |||||| |||||||||||| Sbjct 181 TTTATCCACTGGGCCAGTCTGGTTGGTTCTTTG 213 >seq65592 Length=292 Score = 136 bits (150), Expect = 4e-27 Identities = 146/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 10620 CTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAGA 10679 || ||||| | | ||||| || || || || ||||| || || ||||| |||||||| | Sbjct 4 CTCTTGGAGTAGTCGGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAA 63 Query 10680 TCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTCTGAACG 10739 || | || |||||||||||||||||||||| ||||| || || ||||| || | |||| Sbjct 64 TCCGCGCAGCAGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACG 123 Query 10740 AAGGTCTTCGTGCATGGATGGCACCAGTTGACCAACCACACGAAAGCTTTGTTTTCCCAG 10799 ||||| ||||||| |||||||| | || || || || |||| | || | ||||| | Sbjct 124 AAGGTATTCGTGCGTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTG 183 Query 10800 AAGAAGTTCTTCC 10812 | || ||||| || Sbjct 184 AGGAGGTTCTACC 196 >seq70055 Length=284 Score = 98.7 bits (108), Expect = 1e-15 Identities = 167/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874 ||||| || | ||||||||| | | || || |||||||||||||||||||| || Sbjct 242 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTGGGTTGGTCCGGT 183 Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934 ||| | || ||||| || ||| |||| | || || ||| | || || || || ||| Sbjct 182 CTATTGCTCTTTCCTTGCGCCTATTTTGCCGTGGGGGGTTGGTTCACAGGTACCACCTTT 123 Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTT 9994 || || ||||| ||||| ||| | |||||| || | || ||| ||| ||| | Sbjct 122 GTAACTTCATGGTATACTCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 63 Query 9995 ACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 10054 || || || ||||| || |||||| || | | | || ||| | | |||| |||||| Sbjct 62 ACTGCAGCAGTCTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGT 3 Query 10055 CC 10056 || Sbjct 2 CC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515998001496000