Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq33732 109 5e-19 seq56145 91.5 1e-13 seq56144 91.5 1e-13 seq56143 91.5 1e-13 seq2805 87.8 2e-12 seq2803 87.8 2e-12 seq2802 87.8 2e-12 seq2799 82.4 6e-11 >seq33732 Length=802 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| | || || || |||||||| || ||| |||| Sbjct 479 ATGCAAATCTTTGTCAAAACCCTTACAGGAAAGACCATTACACTAGAGGTGGAGAGTTCA 538 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || ||||| || ||| ||||||||||| | || || ||| Sbjct 539 GACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATTCCACCGGACCAA 598 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || |||||||| |||||||| | |||||| | |||| |||||||||| ||| Sbjct 599 CAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACAAC 658 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 || || |||||||| || || || Sbjct 659 ATCCAGAAAGAATCCACCCTCCA 681 >seq56145 Length=1576 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| |||| || |||||||| || || ||| | || Sbjct 978 ATGCAAATCTTCGTGAAAACCCTAACCGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | ||| || ||| |||||||| ||| | || |||||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| || | ||||||||||| || ||| |||| || | |||| | || |||||||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || ||||| |||||||| || |||| | | | || |||||||| Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGTTCTTCGCCTGCGTGGAGGGAT 749 >seq56144 Length=1637 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| |||| || |||||||| || || ||| | || Sbjct 978 ATGCAAATCTTCGTGAAAACCCTAACCGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | ||| || ||| |||||||| ||| | || |||||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| || | ||||||||||| || ||| |||| || | |||| | || |||||||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || ||||| |||||||| || |||| | | | || |||||||| Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGTTCTTCGCCTGCGTGGAGGGAT 749 >seq56143 Length=1408 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| |||| || |||||||| || || ||| | || Sbjct 978 ATGCAAATCTTCGTCAAAACGCTAACTGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | ||| || ||| |||||||| ||| | || |||||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| || | ||||||||||| || ||| |||| || | |||| | || |||||||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || ||||| |||||||| || |||| | | | || |||||||| Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGTTCTTCGCCTGCGTGGAGGGAT 749 >seq2805 Length=580 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || |||||||| || || || || | || || || ||||| || |||| || | Sbjct 254 AAGATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAGT 313 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 ||||| || | | | || | ||| || || ||||| || || | || ||| Sbjct 314 TCAGATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCGCCCGAT 373 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 |||||||| || |||||||| |||||||| | |||||| | |||| |||||||||| Sbjct 374 CAACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTAC 433 Query 28731 AACATTCAAAAAGAATCTACTCTGCA 28756 ||||| || |||||||| || || || Sbjct 434 AACATCCAGAAAGAATCCACCCTCCA 459 >seq2803 Length=533 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || | || || || ||||| || || ||| ||| Sbjct 421 ATGCAAATTTTTGTCAAGACCCTTACCGGAAAGACCATAACTTTGGAGGTAGAAAGTTCT 362 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| ||||| |||||||||||| | || ||| || Sbjct 361 GATACAATTGATAATGTGAAGACTAAAATTCAGGACAAAGAGGGAATTCCTCCAGACCAG 302 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || || ||||| || || |||||||| ||| | ||| |||| |||||||| Sbjct 301 CAGAGGCTAATTTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTGGCTGATTATAAT 242 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 || || || |||||||||||||| Sbjct 241 ATACAGAAGGAATCTACTCTGCA 219 >seq2802 Length=1024 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || | || || || ||||| || || ||| ||| Sbjct 912 ATGCAAATTTTTGTCAAGACCCTTACCGGAAAGACCATAACTTTGGAGGTAGAAAGTTCT 853 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| ||||| |||||||||||| | || ||| || Sbjct 852 GATACAATTGATAATGTGAAGACTAAAATTCAGGACAAAGAGGGAATTCCTCCAGACCAG 793 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || || ||||| || || |||||||| ||| | ||| |||| |||||||| Sbjct 792 CAGAGGCTAATTTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTGGCTGATTATAAT 733 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 || || || |||||||||||||| Sbjct 732 ATACAGAAGGAATCTACTCTGCA 710 >seq2799 Length=391 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| |||||||| || || | || || || ||||| ||| || || ||| Sbjct 68 ATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATCACCCTTGAGGTTGAGAGTTCT 127 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | ||| || || ||||||||||| | || ||||| Sbjct 128 GACACAATTGACAATGTGAAGGCCAAGATACAAGACAAAGAGGGTATCCCACCGGATCAG 187 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| ||||||||||| || ||||| | |||||| |||| ||||||||||||| Sbjct 188 CAGAGGCTTATCTTTGCTGGAAAACAGCTCGAAGATGGCCGAACTCTGGCCGATTATAAT 247 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 ||||| || ||||| || || || Sbjct 248 ATTCAGAAGGAATCCACCCTTCA 270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425017721380761