Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq63568 668 0.0 seq67767 120 3e-22 seq56135 113 5e-20 seq70055 109 6e-19 >seq63568 Length=1222 Score = 668 bits (740), Expect = 0.0 Identities = 742/987 (75%), Gaps = 2/987 (0%) Strand=Plus/Minus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || ||||||||| | |||||||| || ||||| ||||| |||| ||||| || || || Sbjct 1083 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1024 Query 160936 ATGATTCCCTGCTTGCTCGCTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTCC 160994 ||||| || ||| | | || || | ||| || || || || ||| ||| ||| || Sbjct 1023 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCC 965 Query 160995 CCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAA 161054 || || || || || || |||||||| || || |||| || || | || |||||||| Sbjct 964 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAA 905 Query 161055 CATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCAT 161114 || || |||||||| |||| ||| ||||| ||||||||| ||||||| ||||| || Sbjct 904 TATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGAT 845 Query 161115 CTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 161174 |||||||| ||| | || |||||| | ||||| |||||||||| |||| |||| Sbjct 844 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 785 Query 161175 GTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCG 161234 | |||||| | |||| | | ||||||||||||||||||||||||| || || Sbjct 784 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCG 725 Query 161235 TCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGC 161294 |||||| ||||| ||||||||| || ||||| || ||||| ||||| || || | ||| Sbjct 724 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCCGTCGCAGCTGCTACTGC 665 Query 161295 AGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCAT 161354 ||| ||| || |||| || | |||||||| || || |||| |||||||| || || Sbjct 664 AGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAAT 605 Query 161355 CTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCC 161414 ||||||||| ||||||| ||| |||| || || || ||||| || ||||| |||||||| Sbjct 604 CTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCACCC 545 Query 161415 CTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGG 161474 || || ||| | || ||||| ||||| || ||||| || || |||||||| |||||||| Sbjct 544 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGG 485 Query 161475 TTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGG 161534 ||| |||| || ||| || | | |||||||| ||||| || || || | || Sbjct 484 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 425 Query 161535 TTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGG 161594 ||||| ||||||||||| ||||| ||||| || || || ||||| ||||| || || || Sbjct 424 TTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCACGGTTATTTTGG 365 Query 161595 TCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGC 161654 || |||| |||||||| ||| |||||||| || ||||| | || |||||||| || Sbjct 364 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGCTCTTTACATTTCTTCCTAGC 305 Query 161655 TGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAA 161714 |||||||||||| || || |||||||| || || | || | ||||| ||||| ||||| Sbjct 304 TGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAA 245 Query 161715 CCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACAC 161774 | ||||||||||| || ||||| ||| | ||||||||||| ||| || || || || Sbjct 244 TTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 185 Query 161775 CTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGC 161834 |||||| || || | ||||||||| ||||| |||||||| ||||| || || ||||| Sbjct 184 CTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 125 Query 161835 TCACAACTTCCCTCTTGACCTTGCTGC 161861 ||| || |||||||| ||||| ||||| Sbjct 124 TCATAATTTCCCTCTAGACCTAGCTGC 98 >seq67767 Length=213 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 162372 GACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCC 162431 || || | ||| ||||| ||| | || || || ||||||||||| || || ||||| || Sbjct 3 GATTTTACCCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCT 62 Query 162432 TTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCG 162490 || | | | |||||||| ||| | || || |||||||| || ||| || || | | || Sbjct 63 TTCGGATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCG 121 Query 162491 TCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTAT 162550 ||||| ||||| || || ||||| ||||| |||||||| || ||| ||| || || || Sbjct 122 GCCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTGAT 181 Query 162551 CTATCCTTTGGGACAATCGTCCTGGTTCTT 162580 ||||| |||| || || |||||||| Sbjct 182 TTATCCACTGGGCCAGTCTGGTTGGTTCTT 211 >seq56135 Length=966 Score = 113 bits (124), Expect = 5e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 158341 TACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGCCGTGCAGGC 158400 |||||||| || ||||| ||| | || || || |||||| ||||||||||||||| || Sbjct 377 TACATCCTAGATGCAGCGGAGAATGCAGGGGTTGAACTCCCTTACTCGTGCCGTGCTGGA 436 Query 158401 GCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 158460 || || || | ||||| ||||| | || |||||| | || || ||| || || Sbjct 437 GCGTGCTCTACTTGTGCTGGAAAGGTTGTTTCTGGCTCAGTCGATCAATCTGATGGCTCT 496 Query 158461 TTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTGTGTTTCTTATCCTACA 158520 ||| |||||||| ||| | | || || | || || |||||||| ||||| || Sbjct 497 TTCTTGGACGATACTCAACTTAAGGAAGGCTTTGTGCTTACCTGTGTTTCATATCCAACT 556 Query 158521 AGTGATTGTGTGATTGAGACTGACAAGGAAGAGGAACTGTATTGA 158565 ||||||||| || | ||| ||||||||| ||||| || ||| Sbjct 557 GCTGATTGTGTTATCCAAACTCACAAGGAAGGTGAACTTTACTGA 601 >seq70055 Length=284 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176 |||||| | | || |||||| | || |||||||| |||||||| || ||||| || Sbjct 242 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTGGGTTGGTCCGGT 183 Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236 || | || ||||| || ||| |||| | ||||||||| | || || || || || Sbjct 182 CTATTGCTCTTTCCTTGCGCCTATTTTGCCGTGGGGGGTTGGTTCACAGGTACCACCTTT 123 Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTCTT 162296 || || ||||||||||| ||| | || ||||||||| | || ||| ||||| | Sbjct 122 GTAACTTCATGGTATACTCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 63 Query 162297 ACTGCGGCAGTTTCTACTCCAGC 162319 ||||| ||||| |||||||| || Sbjct 62 ACTGCAGCAGTCTCTACTCCTGC 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547236021772440