Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq63568 554 1e-153 >seq63568 Length=1222 Score = 554 bits (614), Expect = 1e-153 Identities = 724/995 (73%), Gaps = 10/995 (1%) Strand=Plus/Plus Query 17828 GATTGAAGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCC 17887 || || ||||| ||||| ||||| |||||||||||||| || ||||||||||| | || Sbjct 94 GACTGCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACC 153 Query 17888 AAGGTTAGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCT---CCAGCTGC 17944 ||||||||| | ||| | | |||||||| ||| | || | ||| | | | | Sbjct 154 AAGGTTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAAC 213 Query 17945 TACAATGGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCAT 18004 |||| |||||||| || ||||| ||||| | ||| |||||||||||| ||| || | Sbjct 214 TACA---GATTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAA 270 Query 18005 AGAGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCT 18064 | ||||| ||| || | || ||||||||||| | ||||||||||| | | Sbjct 271 CGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAGCGAGA 330 Query 18065 ATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAAT 18124 |||||| || |||||||| |||||||| | || ||||| || || ||||| || ||||| Sbjct 331 ATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAAT 390 Query 18125 ATTATACGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGT 18184 |||||| || ||||| ||||| || ||| | || || | || ||| ||| || || Sbjct 391 ATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGT 450 Query 18185 CGTTTCTCTAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCC 18244 ||||| || || | ||||| || | |||||||||||| ||||| | || Sbjct 451 GGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCC 510 Query 18245 ACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGC 18304 |||||||| || || ||||| | ||| || || || |||||||| ||||| || || || Sbjct 511 GCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGC 570 Query 18305 TTGGAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAA 18364 || ||||| | ||| || ||||||||||| || || |||||||||||||| || || Sbjct 571 CTGAAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAAA 630 Query 18365 ACTCCCTTGTCCAAAAGGATA-AACGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCG 18422 || ||||| |||| || || | | ||||| |||| || | |||||||| || || || Sbjct 631 GCTTCCTTGACCAATTGGGTAGATCAAGAAA-ACTGCAGTA-GCAGCTGCGACGGGAGCT 688 Query 18423 GAATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGT 18482 ||||| |||||| |||||| ||||||||||| || | | ||||||||||||| | || Sbjct 689 GAATATGCAACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGA 748 Query 18483 CCCATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCG 18542 ||||||||| || | || | | ||||| | ||||| |||| ||| || || || Sbjct 749 CCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCA 808 Query 18543 TTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATT 18602 || |||||||| || || | || |||||||||||| || ||||| ||||| | |||||| Sbjct 809 TTGTATAACCATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATA 868 Query 18603 GCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCT 18662 || ||| | || | || || || || || || |||||||| || |||| | ||| Sbjct 869 GCCGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCA 928 Query 18663 GAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAA 18722 || |||||||||||||||||||| || || || ||||| ||||||| || || || | | Sbjct 929 GAAACAGGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATA 988 Query 18723 AATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAG 18782 ||| | | || |||||| || | | ||||||||| | || |||||||| || | ||| Sbjct 989 AATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAA 1048 Query 18783 AGGCGGTTGTTTGTACTCGTAACCCAGTCACATAA 18817 || ||||| | || || || | ||||| ||| || Sbjct 1049 AGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 1083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151184244794946