Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq63568 524 1e-143 seq65592 156 5e-33 seq56135 111 2e-19 seq67767 109 7e-19 seq47049 91.5 2e-13 seq70055 86.0 8e-12 >seq63568 Length=1222 Score = 524 bits (580), Expect = 1e-143 Identities = 690/961 (72%), Gaps = 4/961 (0%) Strand=Plus/Plus Query 103172 GCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAGA 103231 ||||| ||||| || ||||| || ||||| ||||| || ||||| ||||||||||| || Sbjct 98 GCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGG 157 Query 103232 CCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGATG 103291 ||| ||||| | || || |||||||| || | |||||||| |||| ||||| | Sbjct 158 TTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACA 217 Query 103292 GACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGTG 103351 || ||||| || ||||| || || | ||||| ||||| ||||| | ||| | ||||| Sbjct 218 GATTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTA 277 Query 103352 AACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTTG 103411 ||||||||||| ||||| || | || |||||| Sbjct 278 AACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAGCGAGAATTGTTG 337 Query 103412 AATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTAT 103471 || || |||||||||||||| || || || ||||| ||||| ||||| || || || Sbjct 338 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAATATTATAG 397 Query 103472 GTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTCA 103531 || ||||||||||| ||||| ||||||| | || ||||||| |||| || || || Sbjct 398 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 457 Query 103532 C-GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGAA 103590 | || | | | || | || |||| |||||||||||||||||||| || || || ||||| Sbjct 458 CTGATCAAACTAGAAGTTACCAAG-GAACCGTGCATAGCACTGAATAGGGAGCCGCCGAA 516 Query 103591 GACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGGAA 103650 || ||||| || || | |||||| || |||||||| ||||| ||||| || || || || Sbjct 517 TACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAA 576 Query 103651 GACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAACC 103710 || | ||| ||||||| || || || || || | ||||||| |||| || || || Sbjct 577 TACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAAAGCTTCC 636 Query 103711 TTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATGC 103770 |||||||| ||||||| |||||| ||||| | ||||| || || ||||| || ||||| Sbjct 637 TTGACCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCGACGGGAGCTGAATATGC 696 Query 103771 GACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATATA 103830 ||| ||||| |||||||| |||||||| | | |||||||||||| ||||| || Sbjct 697 AACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTA 756 Query 103831 TGCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATACAG 103890 | | |||| | |||||| | || | |||| |||||||||| || || | Sbjct 757 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAA 816 Query 103891 CCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTGGA 103950 ||| ||||||| ||||| |||||||| || || || ||||| | ||| || || || Sbjct 817 CCATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGA 876 Query 103951 GGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGACGGG 104010 | |||| || |||||||| || || ||||| ||||| | || || |||| || || Sbjct 877 AGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGG 936 Query 104011 TTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA-GCAGA 104069 |||||||| || || ||||| || ||||| || || | |||||| | || || |||| Sbjct 937 CTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGA 996 Query 104070 TGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGACGGT 104129 ||||| | ||| | || |||||||||| ||||| ||||| |||| || ||||||| Sbjct 997 -AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGT 1055 Query 104130 T 104130 | Sbjct 1056 T 1056 >seq65592 Length=292 Score = 156 bits (172), Expect = 5e-33 Identities = 151/194 (78%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | ||| | ||||| ||||| |||| || ||||||||| || ||||| Sbjct 211 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 152 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | |||| ||| ||||| | |||||| || || || || || || |||||||| ||| Sbjct 151 TGAGCCGCCATCCACGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAAAGTC 92 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 || || || |||||||||||||| | ||| ||||| || ||||||||||| ||||| ||| Sbjct 91 TCAAATTCAGGATCTTCTGCTGCGCGGATTTCTTGAGAAACAAAGTCATAGGCACGCAGG 32 Query 101890 TTGAGAGCAAGACC 101903 || || || ||||| Sbjct 31 TTCAGGGCCAGACC 18 >seq56135 Length=966 Score = 111 bits (122), Expect = 2e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 102814 ATCCGAAGTTGGGTATGCCACGCAGGTCAGAACAAAACCTGCTTCTAGTTGATCGTCATC 102873 ||| | |||||| |||| || ||||| || ||||| ||| | | |||||| || || Sbjct 562 ATCAGCAGTTGGATATGAAACACAGGTAAGCACAAAGCCTTCCTTAAGTTGAGTATCGTC 503 Query 102874 CAGAAAGGATTGATCTTCTTGATCTACAGTACCCGATTCAATCTTACCAGCACAAGTAGA 102933 || || || ||| |||||| || | || || ||| ||| |||||||||||||| Sbjct 502 CAAGAAAGAGCCATCAGATTGATCGACTGAGCCAGAAACAACCTTTCCAGCACAAGTAGA 443 Query 102934 ACACGCACCAGCACGACAGGAATAAGGCAGATCAACACCTGCTTCATCAGCAGCGTCTAG 102993 ||||| |||||||| || || ||||| || ||||| ||||| | || || || ||||| Sbjct 442 GCACGCTCCAGCACGGCACGAGTAAGGGAGTTCAACCCCTGCATTCTCCGCTGCATCTAG 383 Query 102994 AATATATTGATCATCC 103009 || || ||||||| Sbjct 382 GATGTAAACATCATCC 367 >seq67767 Length=213 Score = 109 bits (120), Expect = 7e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 102257 CAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAAACAGCGA 102316 |||||||||||| ||||| || || ||||| || || || ||| ||||||||||| | Sbjct 213 CAAAGAACCAACCAGACTGGCCCAGTGGATAAATCAGGAAGACAGAAACAAAAACAGCAA 154 Query 102317 TAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCCAACTCGA 102376 | || || ||||| || || ||||| || || || | | || | | ||| | || | Sbjct 153 TTGGACCGGAGAATGCGATTGCATTATAAGGCCGCAATTGAACAGATCGAGCAAGTTCAA 94 Query 102377 ATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAAGCCCAGA 102436 ||||||| | ||| ||||| || | | || |||||||| ||||| ||||||| ||| | Sbjct 93 ATTGACGTAACATAAAACCTATTAATCCGAAAGCACCGTGAAGAGCAACAAAAGTCCACA 34 Query 102437 GTCCCCCAAGTTG 102449 | || || | ||| Sbjct 33 GACCACCTAATTG 21 >seq47049 Length=776 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 102809 ACCACATCCGAAGTTGGGTATGCCACGCAGGTCAGAACAAAACCTGCTTCTAGTTGATCG 102868 || ||||| || | || || || || || || ||||||||||| |||| | || || Sbjct 277 ACAACATCAGACTTAGGATAAGCAACACAAGTAAGAACAAAACCACCTTCAATCTGGTCA 336 Query 102869 TCATCCAGAAAGGATTGATCTTCTTGATCTACAGTACCCGATTCAATCTTACCAGCACAA 102928 ||||| || || || ||| |||||| || ||| ||| ||||||||||| Sbjct 337 TCATCAAGGAAAGAACCATCAGATTGATCAACTTCACCACCAACAACTTTACCAGCACAT 396 Query 102929 GTAGAACACGCACCAGCACGACAGGAATAAGGCAGATCAACACCTGCTTCATCAGCAGCG 102988 | |||||| | |||||| | || || ||||| ||||||| || |||| |||||| | Sbjct 397 GAAGAACAAGAACCAGCTCTGCATGAGTAAGGGAGATCAATTCCAACTTCTTCAGCATGG 456 Query 102989 TCTAGAATATATTGATCATC 103008 || ||||| || |||||| Sbjct 457 TCAAGAATGTAAACATCATC 476 >seq70055 Length=284 Score = 86.0 bits (94), Expect = 8e-12 Identities = 164/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 102481 GGACCCCAAAGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCT 102540 |||||||| |||| | | ||| || | | | | |||||| || || || || || Sbjct 1 GGACCCCACAGTAACAACAAAGAGTGTGCTAAACTATTAGCAGGAGTAGAGACTGCTGCA 60 Query 102541 GTAAGGAAATTAGCACCTTCAAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTA 102600 || | ||| ||| |||||| | || | || | || || |||||||| ||||| Sbjct 61 GTTAAGAAGTTACAACCTTCCAAATAGGAACTTGCCAATCCATGAGTATACCATGAAGTT 120 Query 102601 GCAAACGTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGT 102660 |||| || || || || | ||| ||||| | || | ||| || ||||| || | | Sbjct 121 ACAAAGGTGGTACCTGTGAACCAACCCCCCACGGCAAAATAGGCGCAAGGAAAGAGCAAT 180 Query 102661 AGTCCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCA 102720 || || |||||||||||||| ||||| || || | | ||||||||||| || ||| Sbjct 181 AGACCGGACCAACCCACAAAAACAAAACGGTCCCTCCGTAACCAGTCATCCATAATATCA 240 Query 102721 AA 102722 || Sbjct 241 AA 242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632922381351720