Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq63568 538 1e-148 >seq63568 Length=1222 Score = 538 bits (596), Expect = 1e-148 Identities = 718/995 (72%), Gaps = 2/995 (0%) Strand=Plus/Plus Query 21460 CCTCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAA 21519 |||| || | || ||||| || ||||| || || || || || |||||||| || || | Sbjct 90 CCTCGACTGCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCA 149 Query 21520 AGCCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAG 21579 |||||||| |||||||||| ||| ||||||||||| || || || | || | | | Sbjct 150 TACCAAGGTTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTAT 209 Query 21580 CTAGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAA 21639 | | | |||||||||||| ||||||||||| || ||||||||||| || | || | Sbjct 210 CAACTACAGATTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTA 269 Query 21640 GCGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGG 21699 ||| | |||||| |||||||| |||||||| ||||| || |||||||| | | || | Sbjct 270 ACGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAGCGAG 329 Query 21700 AATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAA 21759 |||| || || ||||||||||||||||| | || |||||||| ||||||||||| |||| Sbjct 330 AATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAA 389 Query 21760 TATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAG 21819 |||| || || |||||||||||||| || ||||||| | || || | | ||| | Sbjct 390 TATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTG 449 Query 21820 TCGTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCC 21879 | || || | || | || || |||| | ||||||||||||| ||| | | Sbjct 450 TGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGC 509 Query 21880 CACCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAG 21939 | || ||||| || || ||||| | ||||||||| || |||||||||||||| ||||||| Sbjct 510 CGCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAG 569 Query 21940 CCTGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAA 21999 |||| || || | ||| ||||||| || || || || || | |||||| |||| |||| Sbjct 570 CCTGAAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAA 629 Query 22000 AAGAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAG 22059 | || || |||| || || | | ||| || ||||| ||||| ||||| ||||| | Sbjct 630 AGCTTCCTTGACCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCGACGGGAGCTG 689 Query 22060 AGTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTC 22119 | || |||||| ||||| || | ||| || || ||| | |||||||||||||| || | Sbjct 690 AATATGCAACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGAC 749 Query 22120 CCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGT 22179 |||||||| | || |||| | |||||| | || | |||| | ||||| || | Sbjct 750 CCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCAT 809 Query 22180 TGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGG 22239 |||| | ||||||||||| | ||||||||||| || ||||| ||||| | ||||| | Sbjct 810 TGTATAACCATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAG 869 Query 22240 CATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAG 22299 | | | |||| | ||| || || || || ||||| || || | || || |||| Sbjct 870 CCGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAG 929 Query 22300 CGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAA 22359 || || || || || ||||| || || || || || || ||| || |||||||||| Sbjct 930 AAACAGGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAA 989 Query 22360 AACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAA 22418 | || || |||| ||| ||| | || ||||| | || || |||||||| | ||| Sbjct 990 ATACAGAAGTTGCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCAATGTAA 1048 Query 22419 AGACGGTTATTAGTAGAGGTGACCCAGGAACAAAA 22453 |||||||| | ||| ||| | |||| ||| || Sbjct 1049 AGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 1083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146078375551020