Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq63568 518 4e-142 seq22106 221 1e-52 seq70055 131 2e-25 seq65592 123 3e-23 >seq63568 Length=1222 Score = 518 bits (574), Expect = 4e-142 Identities = 707/984 (72%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||||||||| ||||| || || ||||| | ||||||||||||||||||||| | ||| Sbjct 101 GCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 160 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || | ||| | || |||| |||| || | | || | | |||||| || ||| Sbjct 161 GCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 220 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 |||||||| ||||||||||| || ||||| ||||| |||| |||||| | | ||| ||| Sbjct 221 TGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTAAAC 280 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288 || | || ||| ||||| || | ||||||||||| || | | | || |||||||| Sbjct 281 CAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAGCGAGAATTGTTGAAA 340 Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348 |||||| |||||||| | || ||||| |||||||| || ||||| || || || ||| Sbjct 341 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAATATTATAGGTT 400 Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408 ||||| ||||| ||||| | ||||| | || || || | ||||| ||||| ||| Sbjct 401 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 460 Query 124409 ATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATT 124468 || | | ||| || || | ||||| ||||| || ||||| || || ||||| | Sbjct 461 ATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAATACA 520 Query 124469 CCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACG 124528 || ||||| ||| |||||| || || ||||| ||||| |||||||| || || || || Sbjct 521 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAATACA 580 Query 124529 AACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGA 124588 | |||||||||||||||||| ||||| || || ||||||||||| || || || ||| Sbjct 581 ATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCTTGA 640 Query 124589 CCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACA 124648 |||| |||||| | ||||| || || ||||| | || || |||||||| |||||| Sbjct 641 CCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCGACGGGAGCTGAATATGCAACA 700 Query 124649 CAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCT 124708 |||||||| ||||| || | | | |||||||||| | |||||||| Sbjct 701 GCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAACAA 760 Query 124709 GAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCAT 124768 | | ||||| | |||||| | || | | | ||||||||||||||| || |||||| Sbjct 761 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAACCAT 820 Query 124769 TCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGAT 124828 |||||||| | ||| |||||||| || ||||| ||||| | |||||||| || | Sbjct 821 TCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGTA 880 Query 124829 GGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCT 124888 |||| || |||||||| || || ||||| || || | | ||| || | || || || Sbjct 881 GGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTCA 940 Query 124889 CTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGC 124947 | || || || ||||| || ||||| || ||||| || || | || || ||| | | Sbjct 941 CGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACA-GAAGT 999 Query 124948 TGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGTT 125007 ||| || | |||| || ||||| | |||||||||||| |||| |||| | ||| | Sbjct 1000 TGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTC 1059 Query 125008 TGTTGATGTTACCCACTCACAGAA 125031 || |||| ||| | |||||| Sbjct 1060 AGTGCTGGTTATCCAGTTACAGAA 1083 >seq22106 Length=3637 Score = 221 bits (244), Expect = 1e-52 Identities = 477/702 (68%), Gaps = 26/702 (4%) Strand=Plus/Plus Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217 || |||||||| | ||||| ||||||||||||||| | |||||| ||||| ||||| Sbjct 1085 TAAAAATGGTGCCAAGTGTTTCTTTACACCAATAGGACCCATGCCAGGGCCTCCTCCTCC 1144 Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACA 138277 || ||||| || ||||||||||| | ||| ||||| || ||||| || ||| || Sbjct 1145 GTGAGGAATGCAAAATGTCTTATGGAGATTGAGATGGCAAACATCGGCTCCAATCCAACC 1204 Query 138278 TGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACC 138337 ||| ||| || |||||||||||||| | || |||||||| | || || || ||||| Sbjct 1205 TGGACTTGTAAGTCCTACCTGTGCATTCATGTTGGCACCATCCATGTACACTTGGCCACC 1264 Query 138338 ATTGTCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGA 138397 ||| ||||| | ||||| || || | || | |||| | ||||||||||| || Sbjct 1265 ATTATCATGGATAATCTTGCAAATATCATCAATACCTTCTTCATAAACACCATGAGTTGA 1324 Query 138398 TGGATATGTAATCATAAT---ACATGAGA-GTTCAAATGTATT-CATGATTGCTTTCTTC 138452 |||||||| | ||||| | || || || | |||| || || | ||||||||| Sbjct 1325 AGGATATGTTACCATAAATGCAGATAAGTTGTCCTTATGTTTTTCAGCA--GCTTTCTTC 1382 Query 138453 TCTAGATCTTTGATGTCTATGTTGCCATCATCATCACA--CT-TGACACCTACAACTTTC 138509 | |||| |||| ||||| || | | ||||| || || | |||| |||| Sbjct 1383 ---AACTCTTCAATGTTAATGTTTCCCTTAGCATCAGTTCCTATGGTA---ACAATTTTC 1436 Query 138510 ATTCCTGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACAT 138569 ||||| |||| | |||||||||||||| || ||||||||||| ||||||| | || Sbjct 1437 ATTCCAACCATAGCAGCACTAGCAGGATTTGTACCATGTGCTGATGCTGGTATAATGCAA 1496 Query 138570 ACATTTCTTTTATCATCTCCTGATCCTTG----ATGATATGCTTGGATTGCTAACAGTCC 138625 || || | | | || ||| |||| ||||||||| | || | | ||||| Sbjct 1497 ACGTTGCGGTGGTGGTCCCCT----CTTGACAAATGATATGCACGAATAACCATGAGTCC 1552 Query 138626 TGCATACTCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCTGTGAT 138685 ||||| || || | || || || ||||| || || | || ||||| || ||||| Sbjct 1553 AGCATATTCTCCAGCAGCACCGGCATTTGGTTGCAAAGAGAAGGAGTCAAATCCAGTGAT 1612 Query 138686 ATCACATAACCATTTCTGTAAGTCATCTATTATCTTTTGATAACCCATGGTCTGTATCA- 138744 ||| ||| | ||||| | | || | ||||| || | |||| ||| Sbjct 1613 GGTACACAACAGGTCACCTAAGTTGGCGAACATTTCCTGATATCCTTGAGCCTGT-TCAG 1671 Query 138745 TAGGTGTATGTGGATGCACGTTGGCAAATTCTTCCCATGACACAGGCATCAGTTCTGCTG 138804 | |||| || |||| | || ||| ||||| ||| ||||||| ||| | || Sbjct 1672 TTGGTGCGAAAGGGTGCAAATCGGTAAAGCTAGGCCATGTCACCGGCATCATTTCAGTTG 1731 Query 138805 CTGCATTTAGTTTCATTGTGCAACTACCAAGTGGAACCATAC 138846 |||||| || |||||||| ||| |||||||| | ||||| Sbjct 1732 TTGCATTCAGCTTCATTGTACAAGATCCAAGTGGGATCATAC 1773 Score = 141 bits (156), Expect = 1e-28 Identities = 208/290 (72%), Gaps = 12/290 (4%) Strand=Plus/Plus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 ||||||||| | ||||| | ||| ||| ||||| |||||||| || || ||||| ||| Sbjct 2223 CCATGATATACAGCATACATAGCAGCCATGTTTGCAAGCAGTGCCTGAGCAGTGCAAATG 2282 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 || ||||| || ||||| || | ||||||||||| |||||||| | || | || | Sbjct 2283 TTGCTGGTGGCCTTGTCCCTACGGATATGCTGCTCCCTAGTTTGCATAGCCATCCTCAAA 2342 Query 139392 GCAGGATTGCCTTC--GCTG--TC--CACTGACTGACCTACAATTCTGCCAGGTATCTTT 139445 || |||| ||| | | || |||| || ||| | ||||| ||||| ||| | Sbjct 2343 GC----TTGCTTTCCAGACGAATCAACACTAAC--ACCGATGATTCTTCCAGGCATCATC 2396 Query 139446 CTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGA 139505 |||||||||| | | || || ||||| |||||||| ||||| || || ||||| ||| Sbjct 2397 CTCTTATACTCTTGCGAAGTAGCCAAGAAAGCAGCATGGGGACCACCATAACCCATCGGA 2456 Query 139506 ATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCCCCACTCACC 139555 | |||||| || || ||| ||| |||||||| ||| ||||||| Sbjct 2457 ACACCAAATCTCTGAGCCGAACCAACAACAATATCAGCTCCAAACTCACC 2506 Score = 82.4 bits (90), Expect = 9e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 |||||| || || || ||||| ||||||| | | || || || | || || || || Sbjct 2807 CATTGCTTCCGCAGCAGCAGTACCTTCATCAAGCAATGAAGCATTCGACATAGGCAAACC 2866 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || || |||| ||||| |||| || |||| || | | || || ||||| Sbjct 2867 AGTGAGATCAGTAATGATGGTTTGAAAATTCAACAAAGACTCAAGACGGCCTTGCGATAT 2926 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTC 140023 |||||||||||| || || || ||| |||||| ||||||||| Sbjct 2927 CTCAGCTTGATAAGGCGTATACTGTGTATACCAAGCAGGATTCTC 2971 >seq70055 Length=284 Score = 131 bits (144), Expect = 2e-25 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 123702 CAGGTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATAC 123761 |||| || ||||||||||| ||||||||||| || || | ||| ||| ||| | | Sbjct 41 CAGGAGTAGAGACTGCTGCAGTTAAGAAGTTACAACCTTCCAAATAGGAACTTGCCAATC 100 Query 123762 CATGTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGAT 123821 |||| ||||||||||| || || ||||| || ||| ||||||||| || | | | || Sbjct 101 CATGAGTATACCATGAAGTTACAAAGGTGGTACCTGTGAACCAACCCCCCACGGCAAAAT 160 Query 123822 ACGCACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTA 123881 | || ||||| | || || ||||| ||||| || | || |||||||| || ||| || Sbjct 161 AGGCGCAAGGAAAGAGCAATAGACCGGACCAACCCACAAAAACAAAACGGTCCCTCCGTA 220 Query 123882 ACCAGTCGTCAAGAACATCAAA 123903 ||||||| || | || |||||| Sbjct 221 ACCAGTCATCCATAATATCAAA 242 >seq65592 Length=292 Score = 123 bits (136), Expect = 3e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || || ||||| || || Sbjct 215 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 156 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | ||||| || || || ||||| Sbjct 155 ATCTTGAGCCGCCATCCACGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAA 96 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||||||||| | || |||||||| |||||||| || || | Sbjct 95 AGTCTCAAATTCAGGATCTTCTGCTGCGCGGATTTCTTGAGAAACAAAGTCATAGGCACG 36 Query 123046 GAGGTTAAGTGCTAGACCTAC 123066 ||||| || || ||||| || Sbjct 35 CAGGTTCAGGGCCAGACCGAC 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578458056980680