Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq63568 587 1e-162 seq67767 145 1e-29 seq56135 143 4e-29 seq47049 122 1e-22 seq70055 107 3e-18 >seq63568 Length=1222 Score = 587 bits (650), Expect = 1e-162 Identities = 724/987 (73%), Gaps = 2/987 (0%) Strand=Plus/Plus Query 26731 GCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAGA 26790 ||||| || || | || |||||||| || || | ||| || || || || | ||||| Sbjct 98 GCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGG 157 Query 26791 CCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACA 26850 ||||||||| | || || ||||| || || | |||||||| || ||||| ||| Sbjct 158 TTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACA 217 Query 26851 GACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTG 26910 || || || || |||||||| || | |||||||||||| ||| | ||| | ||||| Sbjct 218 GATTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTA 277 Query 26911 AACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTG 26970 |||||||| || || || ||||| ||||| |||||||| || || || || || |||||| Sbjct 278 AACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAGCGAGAATTGTTG 337 Query 26971 AATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAG 27030 || |||||||||||||||||| || || || || || || || || || || || ||| Sbjct 338 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAATATTATAG 397 Query 27031 GTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCA 27090 || ||||| ||||||||||| | ||||| | || || ||| |||| || || || Sbjct 398 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 457 Query 27091 CGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAAT 27150 | || | ||| || |||| |||||||||||| ||| || || || |||||| Sbjct 458 CTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAAT 517 Query 27151 ACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAAT 27210 || ||||| ||||| | |||||| || ||||||||||| ||||| || || ||||| ||| Sbjct 518 ACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAAT 577 Query 27211 ACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACCT 27270 |||| ||| |||| |||||||||||||| || ||||||||| |||| || || ||| Sbjct 578 ACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCT 637 Query 27271 TGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGCT 27330 ||||| | || |||| | ||| |||||| | ||||| ||||| ||||| |||||||| Sbjct 638 TGACCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCGACGGGAGCTGAATATGCA 697 Query 27331 ACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATAA 27390 ||| ||||| || |||||||| | |||| | |||||||||||||| ||||| ||| Sbjct 698 ACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAA 757 Query 27391 GCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAAC 27450 | | || | | |||||| | || | |||| |||||||||| || || ||| Sbjct 758 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAAC 817 Query 27451 CACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGAA 27510 || ||||| | ||||| |||||||| || ||||| ||||| | |||||| || ||| Sbjct 818 CATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAA 877 Query 27511 CTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGGT 27570 | || | || ||||||||||| || ||||| || || | || || |||| ||| || Sbjct 878 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGC 937 Query 27571 TCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA-GCAGAC 27629 ||||||||||| |||||||| || || || || || ||||| |||| ||| || |||| Sbjct 938 TCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGA- 996 Query 27630 AGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGTT 27689 |||||| | || | || |||||||||| ||||| ||||| |||| || | |||||| Sbjct 997 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 1056 Query 27690 GTTAGTTGATGTCACCCACTCACAGAA 27716 | ||| || | ||| | |||||| Sbjct 1057 TTCAGTGCTGGTTATCCAGTTACAGAA 1083 >seq67767 Length=213 Score = 145 bits (160), Expect = 1e-29 Identities = 150/194 (77%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 23938 CAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACACGAATACAGCAA 23997 ||||||||||| ||||| |||| ||||| || ||||| ||||| || || ||||||| Sbjct 213 CAAAGAACCAACCAGACTGGCCCAGTGGATAAATCAGGAAGACAGAAACAAAAACAGCAA 154 Query 23998 TAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA-CGTGCCAGTTCA 24056 | ||||| || || || || ||||| || || || | | || ||| || || |||||| Sbjct 153 TTGGACCGGAGAATGCGATTGCATTATAAGGCCGCAATTGAAC-AGATCGAGCAAGTTCA 95 Query 24057 AACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACAAAGGACCAA 24116 || |||||||||||||||||||| | | | || |||||||| ||||||||||| | ||| Sbjct 94 AATTGACGTAACATAAAACCTATTAATCCGAAAGCACCGTGAAGAGCAACAAAAGTCCAC 35 Query 24117 AGCCCTCCAAGTTG 24130 || || || | ||| Sbjct 34 AGACCACCTAATTG 21 >seq56135 Length=966 Score = 143 bits (158), Expect = 4e-29 Identities = 172/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 32608 TCAGTAGAGTTTCTCTTCTTGTTCAGTTTCAATTATAACATCAGAAGTTGGATATGCAAC 32667 |||||| |||| |||| | | ||||| || | | ||||| ||||||||||| ||| Sbjct 601 TCAGTAAAGTTCACCTTCCTTGTGAGTTTGGATAACACAATCAGCAGTTGGATATGAAAC 542 Query 32668 ACAAGTGAGCACAAACCCTTCTTCAATTTGATCATCATCCAAGAACGACTGATCACTTTG 32727 ||| || |||||||| ||||| | || |||| ||| |||||||| || |||| ||| Sbjct 541 ACAGGTAAGCACAAAGCCTTCCTTAAGTTGAGTATCGTCCAAGAAAGAGCCATCAGATTG 482 Query 32728 GTCTACTGTACCAGATACAATCTTACCTGCACAAGATGAACAGGCACCTGCACGACAAGA 32787 || |||| ||||| |||| ||| || ||||||| || || || || ||||| || || Sbjct 481 ATCGACTGAGCCAGAAACAACCTTTCCAGCACAAGTAGAGCACGCTCCAGCACGGCACGA 422 Query 32788 GTAGTTTAAATCAACCCCACCTTCCTCTGCTGCATCAAGGATGTATTGATCATC 32841 ||| | |||||||| | | ||| |||||||| |||||||| |||||| Sbjct 421 GTAAGGGAGTTCAACCCCTGCATTCTCCGCTGCATCTAGGATGTAAACATCATC 368 >seq47049 Length=776 Score = 122 bits (134), Expect = 1e-22 Identities = 171/239 (72%), Gaps = 1/239 (0%) Strand=Plus/Plus Query 32609 CAGTAGAGTTTCTCTTCTTGTTCAGTTTCAATTATAACATCAGAAGTTGGATATGCAACA 32668 |||| ||||| ||||| | | ||| ||||| | ||||||||| | ||||| |||||| Sbjct 245 CAGT-GAGTTCTTCTTCCTTGTGAGTCTCAATAACAACATCAGACTTAGGATAAGCAACA 303 Query 32669 CAAGTGAGCACAAACCCTTCTTCAATTTGATCATCATCCAAGAACGACTGATCACTTTGG 32728 ||||| || ||||| || ||||||| || |||||||| | ||| || |||| ||| Sbjct 304 CAAGTAAGAACAAAACCACCTTCAATCTGGTCATCATCAAGGAAAGAACCATCAGATTGA 363 Query 32729 TCTACTGTACCAGATACAATCTTACCTGCACAAGATGAACAGGCACCTGCACGACAAGAG 32788 || ||| |||| |||| ||||| ||||| || ||||| | ||| || | || ||| Sbjct 364 TCAACTTCACCACCAACAACTTTACCAGCACATGAAGAACAAGAACCAGCTCTGCATGAG 423 Query 32789 TAGTTTAAATCAACCCCACCTTCCTCTGCTGCATCAAGGATGTATTGATCATCAGCACA 32847 || | ||||| ||| |||| || || ||||| ||||| |||||| | ||| Sbjct 424 TAAGGGAGATCAATTCCAACTTCTTCAGCATGGTCAAGAATGTAAACATCATCTGGACA 482 >seq70055 Length=284 Score = 107 bits (118), Expect = 3e-18 Identities = 169/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 24162 GGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCC 24221 |||||||| |||| | | ||| || | | | | |||||| || ||||| ||||| Sbjct 1 GGACCCCACAGTAACAACAAAGAGTGTGCTAAACTATTAGCAGGAGTAGAGACTGCTGCA 60 Query 24222 GTAAGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTA 24281 || | |||||| ||| || | ||||||||| || | |||||| || ||||| || Sbjct 61 GTTAAGAAGTTACAACCTTCCAAATAGGAACTTGCCAATCCATGAGTATACCATGAAGTT 120 Query 24282 ACAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGG 24341 ||||| | || || || | |||||| || | ||||| ||| || |||| || | Sbjct 121 ACAAAGGTGGTACCTGTGAACCAACCCCCCACGGCAAAATAGGCGCAAGGAAAGAGCAAT 180 Query 24342 AGTCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCA 24401 || || |||||||||||||| ||||| || |||| | |||||| |||| || ||| Sbjct 181 AGACCGGACCAACCCACAAAAACAAAACGGTCCCTCCGTAACCAGTCATCCATAATATCA 240 Query 24402 AA 24403 || Sbjct 241 AA 242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664873335669880