Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq17518 161 1e-34 seq17517 161 1e-34 seq46009 114 2e-20 seq20510 113 5e-20 >seq17518 Length=2997 Score = 161 bits (178), Expect = 1e-34 Identities = 605/940 (64%), Gaps = 13/940 (1%) Strand=Plus/Plus Query 75128 CGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT--TCAAC 75185 ||||| | ||| | || ||||||||| ||||||||||||||| | ||||| | || Sbjct 684 CGGGATTTTGACTATGATTACTTTGGATTCAAAACCCTTGAGAGGTCTTATCTGTTGAAA 743 Query 75186 GGCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCA 75245 | | ||||| | | | |||| || || | ||| | ||| |||| | | || | Sbjct 744 G--TTGATGGGACTGTTGTTGAAAGGCCTCAACATATGATAATGAGGGTTTCTGTTGGGA 801 Query 75246 TCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGT 75305 | ||| | | || ||||| || | | |||| || | |||||| || | || Sbjct 802 TTCACAAGCATGATATTGAATCCGCTGTTAAGACTTATCATTTGATGTCTCAGAGATGGT 861 Query 75306 TCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTT 75365 ||| ||| || | ||||| || |||||||| || || || || || ||| || |||| Sbjct 862 TCACTCATGCTTCTCCAACTCTTTTCAATGCCGGGACTCCTAGGCCTCAGTTGAGTAGTT 921 Query 75366 GCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGT 75425 ||||| | || | || || || || | || || |||| || | | |||| Sbjct 922 GCTTCTTGATATGTATGAAAGATGATAGTATTGAAGGGATTTATGATACATTGAAAGAGT 981 Query 75426 GTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCA 75485 | || || || | ||||| || ||||| | | ||| | | || || Sbjct 982 GCGCTGTCATTAGTAAATCTGCTGGAGGGATTGGTGTTTCTGTTCATAACATAAGGGCAT 1041 Query 75486 ATAA-ATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 75544 || | || ||||| || |||||||| || ||||||| ||||||||||| || Sbjct 1042 ATGGCAGCTAC-ATTCGTGGAACAAATGGGACGTCTAATGGTATCATTCCAATGCTGCGT 1100 Query 75545 GTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCAT 75600 || || || | ||| || || ||||| |||| | | || | | | || || | | Sbjct 1101 GTGTTCAATGACACTGCCCGATATGTTGATCAGG-GAGGAGGCAAGAGAAAAGGTGCTTT 1159 Query 75601 CGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAA 75660 || || |||||||||||||||||||| ||| | | || ||| | ||||| | | || Sbjct 1160 TGCTGTATACTTGGAACCATGGCATGCTGATGTATTTGAATTCTTGGAGTTGAAAATAAA 1219 Query 75661 CCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCT 75720 ||| || | ||||| || | ||||| | |||| |||| ||| | || || || Sbjct 1220 CCACGGAAAGGAAGAACAGCGTGCTCGAGATTTATTTTATGCCCTTTGGGTGCCTGATCT 1279 Query 75721 TTTCATGAAGCGGGTTGAGGAGGG-TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCAC 75779 ||| ||| | | ||| |||| |||| | ||||| || || || || | |||| | Sbjct 1280 TTTTATGGAAAGAGTTC-GGAGCAATGGTGATTGGTCCCTGTTTTGCCCCAATGAGGCCC 1338 Query 75780 CAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG 75839 | ||| | | ||| |||||| || | ||| || ||||| |||||||| | Sbjct 1339 CTGGTTTGGCAGACTGTTGGGGTGAAGAATATGAGAATCTGTACACCCAGTATGAAAGAG 1398 Query 75840 AGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCAC 75899 || | ||| || | ||| | ||| | | ||| || ||| | || |||| Sbjct 1399 CTGGAAAAGCAAAGAAGGTTGTTCAAGCACAAAGTCTCTGGTTTGCAATTTTGAAGTCAC 1458 Query 75900 AGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACC 75959 ||| || ||||||| || || ||||||| ||||||||||| || | ||| || |||| Sbjct 1459 AGATAGAAACTGGAAATCCTTACATGCTTTTTAAGGATGCTTGCAATAGGAAAAGCAACC 1518 Query 75960 AAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAG 76019 | | ||| | || ||||| ||| ||||| || ||||| || || | ||||||||| Sbjct 1519 AGCAAAATCTTGGCACAATTAAGTCATCAAACCTGTGCACTGAGATAATTGAGTACACAA 1578 Query 76020 ATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGC 76059 | ||||| || || || || | |||||||| || Sbjct 1579 GTCCAACAGAGACTGCCGTGTGTAACCTTGCATCAATTGC 1618 >seq17517 Length=2996 Score = 161 bits (178), Expect = 1e-34 Identities = 605/940 (64%), Gaps = 13/940 (1%) Strand=Plus/Plus Query 75128 CGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT--TCAAC 75185 ||||| | ||| | || ||||||||| ||||||||||||||| | ||||| | || Sbjct 683 CGGGATTTTGACTATGATTACTTTGGATTCAAAACCCTTGAGAGGTCTTATCTGTTGAAA 742 Query 75186 GGCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCA 75245 | | ||||| | | | |||| || || | ||| | ||| |||| | | || | Sbjct 743 G--TTGATGGGACTGTTGTTGAAAGGCCTCAACATATGATAATGAGGGTTTCTGTTGGGA 800 Query 75246 TCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGT 75305 | ||| | | || ||||| || | | |||| || | |||||| || | || Sbjct 801 TTCACAAGCATGATATTGAATCCGCTGTTAAGACTTATCATTTGATGTCTCAGAGATGGT 860 Query 75306 TCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTT 75365 ||| ||| || | ||||| || |||||||| || || || || || ||| || |||| Sbjct 861 TCACTCATGCTTCTCCAACTCTTTTCAATGCCGGGACTCCTAGGCCTCAGTTGAGTAGTT 920 Query 75366 GCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGT 75425 ||||| | || | || || || || | || || |||| || | | |||| Sbjct 921 GCTTCTTGATATGTATGAAAGATGATAGTATTGAAGGGATTTATGATACATTGAAAGAGT 980 Query 75426 GTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCA 75485 | || || || | ||||| || ||||| | | ||| | | || || Sbjct 981 GCGCTGTCATTAGTAAATCTGCTGGAGGGATTGGTGTTTCTGTTCATAACATAAGGGCAT 1040 Query 75486 ATAA-ATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 75544 || | || ||||| || |||||||| || ||||||| ||||||||||| || Sbjct 1041 ATGGCAGCTAC-ATTCGTGGAACAAATGGGACGTCTAATGGTATCATTCCAATGCTGCGT 1099 Query 75545 GTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCAT 75600 || || || | ||| || || ||||| |||| | | || | | | || || | | Sbjct 1100 GTGTTCAATGACACTGCCCGATATGTTGATCAGG-GAGGAGGCAAGAGAAAAGGTGCTTT 1158 Query 75601 CGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAA 75660 || || |||||||||||||||||||| ||| | | || ||| | ||||| | | || Sbjct 1159 TGCTGTATACTTGGAACCATGGCATGCTGATGTATTTGAATTCTTGGAGTTGAAAATAAA 1218 Query 75661 CCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCT 75720 ||| || | ||||| || | ||||| | |||| |||| ||| | || || || Sbjct 1219 CCACGGAAAGGAAGAACAGCGTGCTCGAGATTTATTTTATGCCCTTTGGGTGCCTGATCT 1278 Query 75721 TTTCATGAAGCGGGTTGAGGAGGG-TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCAC 75779 ||| ||| | | ||| |||| |||| | ||||| || || || || | |||| | Sbjct 1279 TTTTATGGAAAGAGTTC-GGAGCAATGGTGATTGGTCCCTGTTTTGCCCCAATGAGGCCC 1337 Query 75780 CAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG 75839 | ||| | | ||| |||||| || | ||| || ||||| |||||||| | Sbjct 1338 CTGGTTTGGCAGACTGTTGGGGTGAAGAATATGAGAATCTGTACACCCAGTATGAAAGAG 1397 Query 75840 AGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCAC 75899 || | ||| || | ||| | ||| | | ||| || ||| | || |||| Sbjct 1398 CTGGAAAAGCAAAGAAGGTTGTTCAAGCACAAAGTCTCTGGTTTGCAATTTTGAAGTCAC 1457 Query 75900 AGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACC 75959 ||| || ||||||| || || ||||||| ||||||||||| || | ||| || |||| Sbjct 1458 AGATAGAAACTGGAAATCCTTACATGCTTTTTAAGGATGCTTGCAATAGGAAAAGCAACC 1517 Query 75960 AAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAG 76019 | | ||| | || ||||| ||| ||||| || ||||| || || | ||||||||| Sbjct 1518 AGCAAAATCTTGGCACAATTAAGTCATCAAACCTGTGCACTGAGATAATTGAGTACACAA 1577 Query 76020 ATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGC 76059 | ||||| || || || || | |||||||| || Sbjct 1578 GTCCAACAGAGACTGCCGTGTGTAACCTTGCATCAATTGC 1617 >seq46009 Length=1074 Score = 114 bits (126), Expect = 2e-20 Identities = 362/557 (65%), Gaps = 7/557 (1%) Strand=Plus/Plus Query 64674 ACAACTCTGGGAACTCTATAAAAAGGCTCAAATGAGCAATTGGACTGCGGAAGAAGTTGA 64733 |||||||||||| | || ||||||||| || || ||||| || |||||||| || Sbjct 39 ACAACTCTGGGAGATGTACAAAAAGGCTGAAGCCAGTTTCTGGACCGCCGAAGAAGTAGA 98 Query 64734 TTTGTCCAAAGATCTTGACGACTGGAAGACCCTGAATGAAAATGAAAAGAAATTCATAAA 64793 | | ||| | ||| | | | ||| ||| || || || ||| | |||||| Sbjct 99 TCTCTCCTATGATGTACATCATTGGGCAACCTTGTCAGACTCCGAGAAGCACTTCATATC 158 Query 64794 GTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAA 64853 || |||| || || ||||| || |||||||| ||||| |||||| | | | Sbjct 159 ACACGTCCTTGCTTTTTTTGCAACATCTGATGGAATCGTTTTGGAGAATTTGGCTGCAAG 218 Query 64854 TTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCATTCTACGCATATCA-ATGCCATA 64912 ||| | |||| || || || || || || ||||||||| | ||| || || | Sbjct 219 GTTTCTGAATGACGTTCAAATCCCGGAGGCTCGGGCATTCTACGGGTTTCAGATAGCA-A 277 Query 64913 ATGAAATGGTTCATGGCGAAACATATTCAAAATTGATTGACAAATACATTAAGGATGGAT 64972 || | ||||| || | ||| || | || | ||| ||||| ||| | Sbjct 278 TCGAGAATATTCATTCTGAGATGTATAGTTTGCTGTTGGAGACATATATTAAAGATTCAG 337 Query 64973 CTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGA 65032 || ||| | | || || | || || ||| | | || ||| ||| | |||||| Sbjct 338 TCGAGAAGCATAAATTGTTCAATGCAATTGAAAATCTTCCTTGTGTTGCAAGGAAGGCTG 397 Query 65033 AATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCC-TTCGCCGAGCGCCTTTTTGCG 65091 |||||||| ||| ||| || ||| || | || | || || ||| | ||| ||| Sbjct 398 AATGGGCATTGAGTTGGATTAACA----GTTCCACTTCATTTGCGGAGAGGCTTGTTGGT 453 Query 65092 TTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAG 65151 ||||| ||||| || || || || ||||| || ||||| || || | ||| | || Sbjct 454 TTTGCATGTGTTGAAGGGATATTTTTCTCAGGAAGCTTCTGTGCCATATTCTGGCTTAAA 513 Query 65152 AAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGT 65211 ||| | || || |||||||| || |||||||||||||| || || |||| |||||| Sbjct 514 AAGAGAGGACTAATGCCAGGTCTGACATTCTCAAATGAACTAATCTCTAGAGACGAGGGT 573 Query 65212 CTCCACCAGGAGTTTGC 65228 || ||| || ||||| Sbjct 574 CTTCACTGTGATTTTGC 590 >seq20510 Length=2578 Score = 113 bits (124), Expect = 5e-20 Identities = 304/461 (66%), Gaps = 8/461 (2%) Strand=Plus/Minus Query 175191 TGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAA 175250 |||||||| ||| | || | ||||| | || ||| ||| | ||||| ||||| || Sbjct 1692 TGATGTTGCTGGGGTAGATGAAGCCAAGCAGGATTTTGTGGAGGTAGTGGAGTTTCTAAA 1633 Query 175251 GCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGG 175310 | || ||||| | || | ||| || || || ||| | ||||| | || Sbjct 1632 AAAGCCTGAGAGGTTCACTGCTATTGGAGCTCGCATACCGAAAGGAGTTCTTCTTGTTGG 1573 Query 175311 TAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCC 175370 | || || || || ||||| || | ||| || || || |||||| | ||| || Sbjct 1572 TCCCCCGGGGACTGGGAAGACTCTATTAGCCAAGGCTATTGCTGGTGAAGCTGGTGTTCC 1513 Query 175371 ATTCATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAA 175429 || || || | ||||| | | ||||| ||||||||||||||| | ||||| Sbjct 1512 GTTTTTCTCAAT-CTCTGGTTCTGAGTTTGTTGAGATGTTTGTTGGTATTGGTGCTTCCC 1454 Query 175430 GGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATG 175489 | ||||| ||| | || | | ||| || ||| || |||||||| || |||| | Sbjct 1453 GAGTTCGTGATTTATTCAAGAAGGCCAAAGAGAATGCTCCTTGTATTGTTTTTGTTGACG 1394 Query 175490 AGATTGATGCGGTGGGCAAGCAACGCAGCGCTGG---TGGTATGCCAGCAAATGACGAGA 175546 | |||||||| ||||| | |||||| | ||||| |||| || ||||| || | Sbjct 1393 AAATTGATGCTGTGGGGAGGCAACGGGGTGCTGGAATTGGT---GGAGGGAATGATGAAA 1337 Query 175547 GAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCA 175606 | ||||| || |||| ||||| | || || |||||||| ||||| | | ||||| | Sbjct 1336 GGGAACAGACCCTTAACCAACTTTTGACAGAAATGGATGGATTTGAGGGTAATACTGGAA 1277 Query 175607 TTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGAT 175647 | | || ||||| || || || | | ||| || |||||| Sbjct 1276 TCATTGTCATTGCAGCAACCAACAGGGCGGACATTCTTGAT 1236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596012858877920