Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq63568 500 1e-136 >seq63568 Length=1222 Score = 500 bits (554), Expect = 1e-136 Identities = 700/977 (72%), Gaps = 6/977 (1%) Strand=Plus/Plus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| ||||| ||||| || || ||||| | ||||||||||||||||||||| | ||| Sbjct 101 GCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 160 Query 7951 GCTCTGTT--TAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTG 8008 || | ||| ||||| ||| |||| ||| ||| | ||| | | |||||| || | Sbjct 161 GCACGGTTAATAATA--TCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAG 218 Query 8009 ATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTA 8068 |||||||||| || || || || | || || ||||| |||| ||||| | | || | Sbjct 219 ATTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTAA 278 Query 8069 ACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-A 8127 |||| | || ||| || || | | ||| |||||||| || | | | | ||||| | Sbjct 279 ACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAGCGAGAATTGTTGA 338 Query 8128 AACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAG 8187 ||| | ||||| |||||||| |||| ||||| || || |||||||| |||||||||||| Sbjct 339 AACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAATATTATAG 397 Query 8188 GTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCT 8247 || ||||| |||||||| || | ||||| | || ||| || | ||| || || || Sbjct 398 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 457 Query 8248 CTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAAC 8307 ||||| | | ||| || || || |||||||||||||||||||| || || || ||||| Sbjct 458 CTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAAT 517 Query 8308 ATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAAT 8367 | ||| ||||| ||| ||| || || || ||||||||||| |||||||| || || ||| Sbjct 518 ACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAAT 577 Query 8368 ACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCC 8427 || | ||| ||||| || |||||||| || ||||||||||| ||||| || || || Sbjct 578 ACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCT 637 Query 8428 TGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCT 8487 ||||||| ||| || | ||||| ||||| |||||| | || ||||| |||||| Sbjct 638 TGACCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCGACGGGAGCTGAATATGCA 697 Query 8488 ACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAA 8547 ||| ||||| || | |||||| | || | | ||||||| | |||||||||| Sbjct 698 ACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAA 757 Query 8548 GCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAAC 8607 || | |||| | |||||| | | || | | ||| ||||| || || || ||| Sbjct 758 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAAC 817 Query 8608 CACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAA 8667 || ||||| | | ||||||||||| || || || ||||| || || ||||| ||| Sbjct 818 CATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAA 877 Query 8668 GATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGT 8727 | |||| | |||||||| || || |||||||| || | | || || | |||||| Sbjct 878 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGC 937 Query 8728 TCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTA 8787 ||||||||||| || ||||| || || || |||||||| || || | ||||| || | Sbjct 938 TCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAA 997 Query 8788 GCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTG 8847 | || | || ||| ||| ||||| | ||| |||||||| || | ||||| | ||| Sbjct 998 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTT 1057 Query 8848 TTTGTACTTGTAACCCA 8864 | || || || | ||| Sbjct 1058 TCAGTGCTGGTTATCCA 1074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615287654113480