Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq63568 567 2e-157 >seq63568 Length=1222 Score = 567 bits (628), Expect = 2e-157 Identities = 734/1006 (73%), Gaps = 6/1006 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || ||||||||| | || ||| | ||||||||||| |||| |||||| Sbjct 1092 TGGGGTCGCTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTT 1033 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| ||||||| |||| || | | | || || | ||| |||||| ||||||||| Sbjct 1032 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCA 975 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 ||||||||||||| ||||| |||||||| |||||||| ||||| ||||| ||||| || | Sbjct 974 TTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTT 915 Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517 | || ||||| || || ||||||||| | | |||| | || || || | || | Sbjct 914 ACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACT 855 Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577 | || |||| |||||||| || |||| |||||| | |||||||| || |||||| Sbjct 854 TTTACCCGATATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATG 795 Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637 | || | || | |||||| | | ||| | | |||| |||| || || ||||||| Sbjct 794 AACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAAC 735 Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697 || | || || || ||| | || ||||| |||||| || || || || || || | Sbjct 734 TTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCCGTCGCAG 675 Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757 | || |||||||| ||| | |||| ||| |||| ||||| ||||||||||| |||| Sbjct 674 CTGCTACTGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGC 615 Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817 |||| || || || ||||| |||||||| ||| | || || |||||||| ||||| |||| Sbjct 614 CTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTC 555 Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877 ||||||| || || || ||| | ||||| || || ||||| || || || | ||| | Sbjct 554 TTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTG 495 Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937 ||||||| ||| | || || ||| | | | | ||||| || ||||| ||| Sbjct 494 CTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTG 435 Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997 ||| | || |||| |||||||||||||| || || ||||| ||||| || || || | Sbjct 434 CTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCACG 375 Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCAC 43056 |||| ||||| || | |||||||||||||| | |||| || ||| ||||||||| || Sbjct 374 GTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAACAATTCTCGCTCTTTACAT 316 Query 43057 TTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACT 43116 ||||| || || |||||||| || || || || ||||| || | | || |||| ||| Sbjct 315 TTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACT 256 Query 43117 ATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCAT 43176 ||||| || || || |||||||| || ||||||||||| | ||||||| ||| || | Sbjct 255 ATGGCTTTCAATTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGT 196 Query 43177 GTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCAC 43236 || || ||| |||||||||||| | || ||||| |||||||| | || || ||||| Sbjct 195 GTAATTAATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCAT 136 Query 43237 GAGCGGAATGCACATAACTTCCCGCTTGATCTTGCATCCGTGGAGG 43282 || || ||||| ||||| ||||| || || || || | || |||| Sbjct 135 GAACGTAATGCTCATAATTTCCCTCTAGACCTAGCTGCAGTCGAGG 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143405547318132