Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq63568 471 1e-128 >seq63568 Length=1222 Score = 471 bits (522), Expect = 1e-128 Identities = 697/985 (71%), Gaps = 2/985 (0%) Strand=Plus/Plus Query 40532 AGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACT 40591 ||||| ||||||||| || || ||||| ||||| || ||||| ||||||||||| || | Sbjct 100 AGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 159 Query 40592 CTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGA 40651 | ||||| || ||||||||| ||| ||| || ||| | | || ||||| || Sbjct 160 AGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGA 219 Query 40652 CTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAG 40711 |||||||| || |||||||| | || ||||||||||| ||||| | | ||||| Sbjct 220 TTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTAAA 279 Query 40712 CCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAA 40771 ||| || || | || || ||||| | || ||||| |||| | || ||||||||| Sbjct 280 CCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAGCGAGAATTGTTGAA 339 Query 40772 TGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGT 40831 ||||||||| || || | || ||||| |||||||| |||||||| || ||||| || Sbjct 340 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAATATTATAGGT 399 Query 40832 CTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCG 40891 || | || ||||| || | || || | || |||||| |||| ||||| |||| Sbjct 400 TTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCT 459 Query 40892 AATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGAC 40951 || | ||||| || | | |||||||||||| || | | || || || || Sbjct 460 GATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAATAC 519 Query 40952 GCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGAC 41011 || || || || | ||| || ||||||||||| ||||| || || || || || || || Sbjct 520 ACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAATAC 579 Query 41012 AAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTG 41071 || ||| |||||||| || ||| |||||||| |||||||||||| || || || || Sbjct 580 AATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCTTG 639 Query 41072 ACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCAC 41131 ||| | ||| || | ||||| || || ||| |||| | ||||||| ||||| || Sbjct 640 ACCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCGACGGGAGCTGAATATGCAAC 699 Query 41132 AAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTATGC 41191 | ||||| || | |||||| || | | ||||||||||| | ||| ||| Sbjct 700 AGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAACA 759 Query 41192 TGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCA 41251 ||||| || | ||| ||||| | ||||| |||| ||| || || || ||||||| ||| Sbjct 760 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAACCA 819 Query 41252 CTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCT 41311 || || | | | |||||||| || ||||| || || | ||||| || ||| | Sbjct 820 TTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGT 879 Query 41312 CGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTC 41371 |||| | || ||||| ||||||||||| ||||| | || || || ||||| ||||| Sbjct 880 AGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTC 939 Query 41372 ACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGG 41430 ||| || ||||| |||||||| || || || || || || ||||| || || ||| | | Sbjct 940 ACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACA-GAAG 998 Query 41431 TAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGT 41490 | || || | ||| | || ||||| | ||||||||||| || | ||| || ||||| | Sbjct 999 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTT 1058 Query 41491 CGGTGCTAGTGACCCAGTTACAAAA 41515 | ||||| || | ||||||||| || Sbjct 1059 CAGTGCTGGTTATCCAGTTACAGAA 1083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143574996954906