Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq63568 540 1e-148 >seq63568 Length=1222 Score = 540 bits (598), Expect = 1e-148 Identities = 712/986 (72%), Gaps = 6/986 (1%) Strand=Plus/Plus Query 67359 GCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGT 67418 ||||| ||||| |||||||| || ||||| ||||| || |||||||||||||| ||||| Sbjct 98 GCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGG 157 Query 67419 CCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAACG 67475 || | ||||| || || ||||| ||| ||| || || |||| ||||| Sbjct 158 TTAGCACGGTTAATAATATCAGCCCAGGTATTAATTAC---ACGACCTTGACTATCAACT 214 Query 67476 ACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCA 67535 || |||||||| || |||||||| || | ||||| |||||||| | ||| | || Sbjct 215 ACAGATTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCG 274 Query 67536 GTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTG 67595 || |||||||| | || ||||| | ||||| |||||||| || | | | || ||| Sbjct 275 GTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAGCGAGAATTG 334 Query 67596 TTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTG 67655 |||||| ||||| ||||||||||| || || || || || |||||||| ||||| || Sbjct 335 TTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAATATTA 394 Query 67656 TAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTT 67715 || || ||||| ||||| ||||| ||||||| | || || || | || || ||| Sbjct 395 TAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTT 454 Query 67716 TCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCG 67775 || ||||| | | |||||| || | ||||||||||||||||| || || || || ||| Sbjct 455 TCCCTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCG 514 Query 67776 AATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGG 67835 |||||||| ||||| || | ||| || |||||||||||||| || || ||||| || || Sbjct 515 AATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGA 574 Query 67836 AACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAA 67895 || || | ||| |||| ||||||||||| || || |||||||| | || || || Sbjct 575 AATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAAAGCTT 634 Query 67896 CCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTAT 67955 |||||||| | || |||| |||||| || || || || | || ||||| || ||| Sbjct 635 CCTTGACCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCGACGGGAGCTGAATAT 694 Query 67956 GCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAG 68015 || ||| |||||||| |||||||| ||||| || ||||||||||| |||||| | Sbjct 695 GCAACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATG 754 Query 68016 TATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATAC 68075 || | | || | | |||||| | || | |||| |||| |||||||| || Sbjct 755 TAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTAT 814 Query 68076 AACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTT 68135 ||||| ||||| | | ||| |||||||| || || || ||||| | |||||| || Sbjct 815 AACCATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCA 874 Query 68136 GAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACA 68195 ||| |||||| || ||||||||||| || ||||| ||||| | || || || | |||| Sbjct 875 GAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACA 934 Query 68196 GGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAA 68255 || || | |||||||| ||||| |||||||| || |||||||| || || || || | Sbjct 935 GGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACA 994 Query 68256 GTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCGA 68315 | | ||| | | ||| ||| |||||||| ||||| ||||| |||| || | || Sbjct 995 GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGG 1054 Query 68316 TTGTCAACTGAGGTGACCCAGTTACA 68341 || ||| ||| | ||||||||| Sbjct 1055 TTTTCAGTGCTGGTTATCCAGTTACA 1080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566418103612440