Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq63568 636 2e-177 seq65592 174 2e-38 seq67767 120 3e-22 >seq63568 Length=1222 Score = 636 bits (704), Expect = 2e-177 Identities = 725/968 (75%), Gaps = 4/968 (0%) Strand=Plus/Plus Query 67840 GCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAA 67899 ||||| ||||| |||||||| || || || ||||| |||||||||||||||||||| | Sbjct 98 GCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGG 157 Query 67900 CCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATA 67959 ||| ||||| | || || ||||||||| | || ||| |||||||| | | Sbjct 158 TTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACA 217 Query 67960 GACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTG 68019 || ||||| || ||||||||||| | ||||| ||||| ||||| | ||| | || || Sbjct 218 GATTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTA 277 Query 68020 AACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTG 68079 ||||||||||| || |||||||| ||||| |||||||| || | || || || |||||| Sbjct 278 AACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAGCGAGAATTGTTG 337 Query 68080 AACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAA 68139 || ||||| |||||||||| || || || || || || ||||| ||||| || || Sbjct 338 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAATATTATAG 397 Query 68140 GTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCA 68199 || ||||| ||||||||||| ||||||| | || || ||| |||| |||||||| Sbjct 398 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 457 Query 68200 CGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAAT 68259 | | || |||||| |||| |||||| ||||| |||||||| || || || || ||| Sbjct 458 CTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAAT 517 Query 68260 ACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAC 68319 || ||||| || || | ||| || || |||||||| || || || ||||| || || || Sbjct 518 ACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAAT 577 Query 68320 ACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCT 68379 || | ||| |||||||||||||||| || || |||||||| | || || || ||| Sbjct 578 ACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCT 637 Query 68380 TGACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCA 68439 ||||| | || |||| || ||| ||||| | || ||||| || || || || |||||| Sbjct 638 TGACCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCGACGGGAGCTGAATATGCA 697 Query 68440 ACACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTAT 68499 ||| |||||||| |||||||| |||||| | ||||||||| ||||| |||||||| Sbjct 698 ACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAA 757 Query 68500 GCAAAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAAC 68559 | | ||||| | |||||| | | | |||| |||||||||||||||| ||| Sbjct 758 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAAC 817 Query 68560 CACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGAA 68619 || ||||||| || ||| |||||||| || || |||||||| | ||| || || ||| Sbjct 818 CATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAA 877 Query 68620 CTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGGT 68679 |||||| || ||||||||||| || ||||| || || || || || |||| |||||| Sbjct 878 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGC 937 Query 68680 TCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACAGAT 68738 |||||||||||||| || || || || || ||||| ||||| |||| || || ||||| Sbjct 938 TCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGA- 996 Query 68739 GGTTGCTG-CAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGGT 68797 ||||| | ||| || ||||||||||||| || || ||||| |||| |||||| |||| Sbjct 997 AGTTGCGGTCAATAAG-GTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGT 1055 Query 68798 TCTCTGTG 68805 | || ||| Sbjct 1056 TTTCAGTG 1063 >seq65592 Length=292 Score = 174 bits (192), Expect = 2e-38 Identities = 158/199 (79%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || ||||| || ||||| || || ||||||| || ||||||||| || | Sbjct 216 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 157 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || |||| ||| ||||||| |||||| || || ||||| || || ||||||| Sbjct 156 GATCTTGAGCCGCCATCCACGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGA 97 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | ||||| || || || ||||||||||| | ||| ||||| || ||||||||||| |||| Sbjct 96 AAGTCTCAAATTCAGGATCTTCTGCTGCGCGGATTTCTTGAGAAACAAAGTCATAGGCAC 37 Query 66766 GAAGGTTGAGAGCAAGACC 66784 | ||||| || || ||||| Sbjct 36 GCAGGTTCAGGGCCAGACC 18 >seq67767 Length=213 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 67140 AAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAACAAAAACAGCGATA 67199 || ||||||| || || ||||| || || || || |||||| |||||||||||| || Sbjct 211 AAGAACCAACCAGACTGGCCCAGTGGATAAATCAGGAAGACAGAAACAAAAACAGCAATT 152 Query 67200 GGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGA-CGTGCCAGTTCAAA 67258 ||||| ||||| || || ||||| || || || | | || ||| || || |||||||| Sbjct 151 GGACCGGAGAATGCGATTGCATTATAAGGCCGCA-ATTGAACAGATCGAGCAAGTTCAAA 93 Query 67259 CTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCCACAAAATTCCAGAG 67318 || || | ||| ||||| |||| ||||||| ||||| || || |||||| |||| || Sbjct 92 TTGACGTAACATAAAACCTATTAATCCGAAAGCACCGTGAAGAGCAACAAAAGTCCACAG 33 Query 67319 TCCTCCAAGTTGGATCCAGCGGACGAAATC 67348 || || | ||| ||| ||| ||||| Sbjct 32 ACCACCTAATTGACACCAACGGGTAAAATC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571520537381880