Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq56144 127 4e-24 seq2801 123 4e-23 seq56143 122 2e-22 seq56145 118 2e-21 seq2800 111 3e-19 seq2805 105 1e-17 seq2804 102 1e-16 seq53415 91.5 3e-13 >seq56144 Length=1637 Score = 127 bits (140), Expect = 4e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || |||||||| || | || | || || || || ||||||| || |||| Sbjct 992 CGGAGTACCAGGTGGAGCGTTGATTCCTTCTGTATGTTGTAGTCGGCTAGGGTTCGGCCG 1051 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || || |||||||||||||| || || | ||| ||||| ||||| ||||| || || Sbjct 1052 TCTTCCAACTGTTTTCCGGCAAAGATCAACCGCTGCTGATCGGGAGGAATTCCCTCCTTG 1111 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || | ||| | || || || ||||| || ||||| ||||| ||||| Sbjct 1112 TCTTGAATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGGATTCAACCTCTAGGGTTATG 1171 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| ||||| ||||| ||||| |||||||| Sbjct 1172 GTTTTACCGGTTAGGGTTTTCACAAAGATTTGCAT 1206 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| |||| ||| | |||| |||||| |||||||| || | | ||||| Sbjct 764 CGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCG 823 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| ||||| ||||| || |||| ||||||||| ||||| ||||||||||| Sbjct 824 TCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTG 883 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | || | || || || || || || ||||| || || || || Sbjct 884 TCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATG 943 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || ||||| ||||| || || |||||||| Sbjct 944 GTTTTTCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 Score = 107 bits (118), Expect = 3e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 193149 AGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCG 193208 || || || || | ||||| || || ||||||||| || | | || | ||| Sbjct 539 AGAACAAGGTGAAGTGTAGATTCCTTCTGAATATTATAATCAGCAAGAGTGCGTCCATCT 598 Query 193209 TCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCT 193268 || | |||||| || ||||| || | | |||||||||||| ||||| ||||| ||||| Sbjct 599 TCAAGTTGTTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGTATCCCTTCCTTATCC 658 Query 193269 TGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTT 193328 || || |||| ||| | ||| ||||||||| ||| ||| || || | ||| || || Sbjct 659 TGAATCTTGGCTTTCACATTATCAATAGTATCCGAACTCTCCACCTCCAAAGTAATTGTC 718 Query 193329 TTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| |||| || || ||||| || ||||| Sbjct 719 TTACCCGTTAAAGTCTTGACAAAAATCTGCAT 750 >seq2801 Length=469 Score = 123 bits (136), Expect = 4e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||||||||| ||||| || || | || | || || || || || || Sbjct 302 ATTCCACCTCTCAATCGGAGTACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCA 243 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | | ||| || |||||||| || ||||| || | || || ||||||||| Sbjct 242 GCAAGGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAGATAAGCCTTTGCTGATCAGGA 183 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| |||||||| ||||| | ||| | || || ||||| ||| ||| Sbjct 182 GGAATACCTTCCTTATCTTGGATTTTAGATTTCACGTTGTCTATGGTATCAGAACTCTCC 123 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || ||||| |||||||| || || | ||||| ||||| |||||||| || Sbjct 122 ACCTCAAGAGTGATAGTTTTGCCGGTCAATGTTTTCACAAAGATTTGCATCTT 70 Score = 111 bits (122), Expect = 3e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||| || ||||| || | ||||| ||||||||||| || ||||| ||| Sbjct 455 TCCTCAAGTTGTTTCCCTGCAAATATAAGCCTCTGCTGATCAGGAGGGATACCTTCCTTA 396 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || ||||| |||| ||| | ||| ||||||||| || || ||||| || || || || Sbjct 395 TCCTGTATCTTGGCTTTGACATTATCAATAGTATCAGAGGATTCAACCTCAAGGGTGATG 336 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || ||||| | || || ||||| || |||||| Sbjct 335 GTCTTCCCTGTCAAGGTCTTGACAAAGATCTGCATT 300 >seq56143 Length=1408 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| |||| ||| | |||| |||||| |||||||| || | | ||||| Sbjct 764 CGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCG 823 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| ||||| ||||| || |||| ||||||||| ||||| ||||||||||| Sbjct 824 TCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTG 883 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | || | || || || || || || ||||| || || || || Sbjct 884 TCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATG 943 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || ||||||||||| || || |||||||| Sbjct 944 GTTTTTCCAGTTAGCGTTTTGACGAAGATTTGCAT 978 Score = 107 bits (118), Expect = 3e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 193149 AGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCG 193208 || || || || | ||||| || || ||||||||| || | | || | ||| Sbjct 539 AGAACAAGGTGAAGTGTAGATTCCTTCTGAATATTATAATCAGCAAGAGTGCGTCCATCT 598 Query 193209 TCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCT 193268 || | |||||| || ||||| || | | |||||||||||| ||||| ||||| ||||| Sbjct 599 TCAAGTTGTTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGTATCCCTTCCTTATCC 658 Query 193269 TGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTT 193328 || || |||| ||| | ||| ||||||||| ||| ||| || || | ||| || || Sbjct 659 TGAATCTTGGCTTTCACATTATCAATAGTATCCGAACTCTCCACCTCCAAAGTAATTGTC 718 Query 193329 TTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| |||| || || ||||| || ||||| Sbjct 719 TTACCCGTTAAAGTCTTGACAAAAATCTGCAT 750 >seq56145 Length=1576 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| |||| ||| | |||| |||||| |||||||| || | | ||||| Sbjct 764 CGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCG 823 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| ||||| ||||| || |||| ||||||||| ||||| ||||||||||| Sbjct 824 TCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTG 883 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | || | || || || || || || ||||| || || || || Sbjct 884 TCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATG 943 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || ||||| ||||| || || |||||||| Sbjct 944 GTTTTTCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 Score = 107 bits (118), Expect = 3e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 193149 AGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCG 193208 || || || || | ||||| || || ||||||||| || | | || | ||| Sbjct 539 AGAACAAGGTGAAGTGTAGATTCCTTCTGAATATTATAATCAGCAAGAGTGCGTCCATCT 598 Query 193209 TCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCT 193268 || | |||||| || ||||| || | | |||||||||||| ||||| ||||| ||||| Sbjct 599 TCAAGTTGTTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGTATCCCTTCCTTATCC 658 Query 193269 TGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTT 193328 || || |||| ||| | ||| ||||||||| ||| ||| || || | ||| || || Sbjct 659 TGAATCTTGGCTTTCACATTATCAATAGTATCCGAACTCTCCACCTCCAAAGTAATTGTC 718 Query 193329 TTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| |||| || || ||||| || ||||| Sbjct 719 TTACCCGTTAAAGTCTTGACAAAAATCTGCAT 750 >seq2800 Length=224 Score = 111 bits (122), Expect = 3e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||| || ||||| || | ||||| ||||||||||| || ||||| || Sbjct 210 TCCTCAAGTTGTTTCCCTGCAAATATAAGCCTCTGCTGATCAGGAGGGATACCTTCCTTG 151 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | ||| | ||| ||| ||||| ||| |||||| || | ||| ||| Sbjct 150 TCCTGAATCTTAGCTTTCACATTATCAATGGTATCTGAACTCTCAACCTCCAAAGTGATA 91 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| ||||||| || || ||||| ||||||||| Sbjct 90 GTTTTTCCTGTTAAAGTCTTGACAAAAATTTGCATT 55 >seq2805 Length=580 Score = 105 bits (116), Expect = 1e-17 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||| | || ||||| | || | ||||| || || || ||| Sbjct 486 ATACCACCACGAAGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCG 427 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || ||||| ||| || | ||||| || ||||| || | ||||||||||| || Sbjct 426 GCCAAAGTTCTGCCATCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGATCGGGC 367 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || |||| || | ||| || ||||| ||| |||| Sbjct 366 GGGATCCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCA 307 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| ||||| || || || || || || || || || || |||||||| || Sbjct 306 ACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCATCTT 254 >seq2804 Length=712 Score = 102 bits (112), Expect = 1e-16 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| |||| |||||| ||||||||||| | | ||| || ||||| || || ||||| || Sbjct 412 ATCCTCTAGTTGTTTGCCGGCAAAAATGAGACGCTGCTGGTCAGGTGGGATCCCTTCCTT 353 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||||| || |||| || | ||| || ||||| ||| ||||||||| ||||| || Sbjct 352 GTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGAT 293 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || || || || || || || |||||||| || Sbjct 292 GGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCATCTT 254 >seq53415 Length=940 Score = 91.5 bits (100), Expect = 3e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || || || || ||||| || || | | ||| ||||| ||||| || || || || Sbjct 309 TCTTCCAACTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGGAGGAATCCCCTCCTTG 250 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || ||||| || | || || || |||||||||||||| || || ||||| Sbjct 249 TCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTTATC 190 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || ||||| ||||| || || || ||||| || Sbjct 189 GTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898814808776880