Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq63568 569 2e-157 seq65592 147 2e-30 seq67767 131 2e-25 seq47049 129 6e-25 seq56135 122 1e-22 seq70055 91.5 2e-13 >seq63568 Length=1222 Score = 569 bits (630), Expect = 2e-157 Identities = 706/961 (73%), Gaps = 4/961 (0%) Strand=Plus/Minus Query 157607 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 157666 ||||| || || | || ||||| || || ||||||| || || | ||| | ||||| Sbjct 1056 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 997 Query 157667 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 157725 ||||| || || |||| ||| | ||||| || || || || || || || || ||||| Sbjct 996 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 938 Query 157726 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATC 157785 || || |||| || || | || || ||||| || || |||||||| || | || | Sbjct 937 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 878 Query 157786 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 157845 ||| || || ||| | ||||| || || || |||||||| ||||| ||||||| || Sbjct 877 TTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAATG 818 Query 157846 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTATCTATGC 157905 | | || || |||||||||| |||| | || | |||||| | ||||| | | Sbjct 817 GTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 758 Query 157906 ATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGT 157965 |||||||| ||||||||||||||| | ||| | ||||||||||| ||||| ||| Sbjct 757 TTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCTGT 698 Query 157966 AGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCA 158025 |||||||| ||||| ||||| || || |||| || ||| | |||| || | ||||| Sbjct 697 TGCATATTCAGCTCCCGTCGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGTCA 638 Query 158026 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 158085 ||| || || |||| ||||||||| || |||||||||||||| |||| ||| |||| Sbjct 637 AGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGT 578 Query 158086 ATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGT 158145 ||| || || || || || || ||||||||||| || || ||| | ||||| ||||| || Sbjct 577 ATTTCAGGCTGAGCATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 518 Query 158146 ATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTC- 158204 |||||| || || || ||| |||||||||||| | || |||| || | | || Sbjct 517 ATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTT-CTAGTTTGATCA 459 Query 158205 GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGAAGAGA 158264 | ||||| || |||| || || || | ||||||| ||||||||||||||||| | Sbjct 458 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAA 399 Query 158265 CCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCAT 158324 ||||||| || || || || || || || || || || |||||||||||||| ||| | Sbjct 398 CCTATAATATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 339 Query 158325 TCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGT 158384 ||||||| || || || || || |||||||| ||||| |||||||| || || ||||||| Sbjct 338 TCAACAATTCTCGCTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGT 279 Query 158385 TCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGT 158444 | ||||| | || || ||| ||||| ||||| | || |||||||| || ||||| | Sbjct 278 TTACCGCGTTAGGTATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAACCAAT 219 Query 158445 CCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCGCTG 158504 | | ||||| |||| |||||||| | || |||||||| ||| | | ||||| ||| Sbjct 218 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTA 159 Query 158505 GTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTG 158564 ||||||||||||||||||||||| ||||| || || || ||||| || ||||| |||| Sbjct 158 ACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGCTG 99 Query 158565 C 158565 | Sbjct 98 C 98 >seq65592 Length=292 Score = 147 bits (162), Expect = 2e-30 Identities = 152/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 160113 GGCCTTGCTCTTAATCTTCGTGCTTACGATTTCGTAAGTCAAGAGATCAGAGCAGCAGAA 160172 || || || || || || ||||| || || || || |||||| ||| | ||||||||| Sbjct 18 GGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCAGAA 77 Query 160173 GATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAACGAAGGACTACGTGCA 160232 ||||| ||||||||||| |||||||||||||| || || || |||||||| | ||||| Sbjct 78 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 137 Query 160233 TGGTTGGCACCTGCTGATCAACCCCATGAAAACTTTATCTTCCCAGAAGAAGTATTGCCT 160292 ||| |||| || ||||| || ||||||||| |||| ||||| || || || | || Sbjct 138 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 197 Query 160293 AGAGGCAACGCCCTTTAAT 160311 | || ||||| ||||||| Sbjct 198 CGTGGAAACGCTCTTTAAT 216 >seq67767 Length=213 Score = 131 bits (144), Expect = 2e-25 Identities = 151/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 159558 CGGTGGTGCCAACTTGGGGGATTATGGAATTTTGTGGCACTCCACGGTGCCTTCGCCCTA 159617 || ||||| ||| | || || | |||| |||||| || || |||||||| |||| || Sbjct 12 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCTTTCGGATTA 71 Query 159618 ATTGGTTTCATGCTCCGTCAGTTTGAACTGGCACG-TCTCATTGGTATCCGTCCTTACAA 159676 || ||||| ||| | ||||| |||||||| || || ||| | | | || ||||| || Sbjct 72 ATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGGCCTTATAA 130 Query 159677 TGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTCATCTACCCATT 159736 ||| || || ||||| ||||| |||||||||||||| |||||||| || || ||| | Sbjct 131 TGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTGATTTATCCACT 190 Query 159737 GGGTCAGTCCAGTTGGTTTTT 159757 ||| ||||| ||||||| || Sbjct 191 GGGCCAGTCTGGTTGGTTCTT 211 >seq47049 Length=776 Score = 129 bits (142), Expect = 6e-25 Identities = 171/235 (73%), Gaps = 3/235 (1%) Strand=Plus/Minus Query 158733 AATGTGAAGAGGATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATT 158792 ||||| ||| ||| |||||||| ||| || ||||||| ||| ||||| | || Sbjct 484 AATGTCCAGATGATGTTTACATTCTTGACCATGCTGAAGAAGTTGGAATTGATCTCCCTT 425 Query 158793 ACTCTTGTCGTGCTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTG 158852 |||| || | |||||| |||| ||||||||||| |||||| |||| ||| |||| Sbjct 424 ACTCATGCAGAGCTGGTTCTTGTTCTTCATGTGCTGGTAAAGTTGTTGGTGGTGAAGTTG 365 Query 158853 ATCAGAGTGATCAGTCGTTCTTAGACGATGATCAGATTGCAGCAGGATTTGTTCTTACGT 158912 |||| |||| || ||| | || ||||| ||||||| || || ||||||||||| | Sbjct 364 ATCAATCTGATGGTTCTTTCCTTGATGATGACCAGATTGAAGGTGGTTTTGTTCTTACTT 305 Query 158913 GTGTAGCATATCCAACATCTGATTGTGTTGTTGTTACTGATCAAG--AGGAGAAC 158965 |||| || ||||| | |||||| |||| ||| ||| | |||| || ||||| Sbjct 304 GTGTTGCTTATCCTAAGTCTGATGTTGTTATTGAGACTCA-CAAGGAAGAAGAAC 251 >seq56135 Length=966 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 158750 TACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATTACTCTTGTCGTGCTGGT 158809 ||||| ||||| ||||| || | ||||| ||||| | |||||| || |||||||| Sbjct 377 TACATCCTAGATGCAGCGGAGAATGCAGGGGTTGAACTCCCTTACTCGTGCCGTGCTGGA 436 Query 158810 GCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCG 158869 || |||||| | ||||| || || |||| ||||| | || ||||| |||| || Sbjct 437 GCGTGCTCTACTTGTGCTGGAAAGGTTGTTTCTGGCTCAGTCGATCAATCTGATGGCTCT 496 Query 158870 TTCTTAGACGATGATCAGATTGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACA 158929 ||||| |||||| ||| || | ||| ||||| ||||| ||||| |||||||||| Sbjct 497 TTCTTGGACGATACTCAACTTAAGGAAGGCTTTGTGCTTACCTGTGTTTCATATCCAACT 556 Query 158930 TCTGATTGTGTT 158941 ||||||||||| Sbjct 557 GCTGATTGTGTT 568 >seq70055 Length=284 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 159306 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGACTACTACTTCTT 159365 ||||||||| | | || || |||||||||||||| ||||| || ||| | || || Sbjct 230 GATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTGGGTTGGTCCGGTCTATTGCTCTTT 171 Query 159366 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 159425 || || ||| | ||| | || |||||| | || || || | ||||| || ||| Sbjct 170 CCTTGCGCCTATTTTGCCGTGGGGGGTTGGTTCACAGGTACCACCTTTGTAACTTCATGG 111 Query 159426 TACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTCTCACAGCAGCTGTC 159485 || || || || | || ||||||||| | || ||| |||||| | || ||||| ||| Sbjct 110 TATACTCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTAACTGCAGCAGTC 51 Query 159486 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 159535 || || |||||| | | | | || ||| | | |||| |||||||| Sbjct 50 TCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGTCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547862636445880