Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq63568 625 3e-174 seq65592 168 7e-37 seq70055 131 2e-25 seq67767 113 5e-20 seq47049 107 2e-18 seq56135 96.9 4e-15 >seq63568 Length=1222 Score = 625 bits (692), Expect = 3e-174 Identities = 733/988 (74%), Gaps = 2/988 (0%) Strand=Plus/Minus Query 150838 CTTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTGCT 150897 ||| ||| ||||| | ||| ||| | |||||||| || | || ||||| ||||| | Sbjct 1084 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 1025 Query 150898 GATGATTCCAACTCTGTTGGCAGCAACCATTTGCTTCATCGTGGCATTCATCGCTGCTCC 150957 |||||| || || | ||| | ||||| | || || | || ||||| ||||| || Sbjct 1024 GATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCC 965 Query 150958 CCCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTACGGTAACAA 151017 || || || || ||||| || ||||| || ||| |||| ||||| | ||||| ||||| Sbjct 964 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAA 905 Query 151018 CATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCAT 151077 || || |||||||| || ||||| ||||| ||||||||| ||||||| || || || Sbjct 904 TATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGAT 845 Query 151078 CTGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 151137 |||||||| || || | ||||||||| | ||||| |||||||||| |||| |||| Sbjct 844 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 785 Query 151138 CTTCCACTTCCTGATTGGTATCTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTACCG 151197 | |||||| | ||||| | | |||||||||||||||||||||||| || || Sbjct 784 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCG 725 Query 151198 CTTGGGTATGCGTCCCTGGATCTGC-GTTGCATACTCTGCTCCAGTTGCTGCTGCGAGTG 151256 |||||||||| || ||||| ||| |||||||| || ||||| || || ||||| | || Sbjct 724 TCTGGGTATGCGCCCTTGGAT-TGCTGTTGCATATTCAGCTCCCGTCGCAGCTGCTACTG 666 Query 151257 CAGTGTTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGTA 151316 |||| ||| | |||| || | |||||||| || || |||| ||||| || || | Sbjct 665 CAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAA 606 Query 151317 TTTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCACC 151376 | ||||| || ||||||| ||| |||| || || || ||||| || ||||| ||||||| Sbjct 605 TCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCACC 546 Query 151377 CCTTCCATATGCTTGGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCACG 151436 | || || ||| | ||||| |||||||| ||||| || || || ||| || ||||||| Sbjct 545 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACG 486 Query 151437 GTTCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTCCCAGAACTATG 151496 |||| |||| |||||| || | | || ||||| ||||| || || || | | Sbjct 485 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 426 Query 151497 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTTG 151556 |||||| ||||||||||| ||||| ||||| || || || || || |||||||| |||| Sbjct 425 GTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCACGGTTATTTTG 366 Query 151557 GTCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCG 151616 | || | ||||||||||| ||| ||||||||||| || || | || |||||||| | Sbjct 365 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGCTCTTTACATTTCTTCCTAG 306 Query 151617 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCA 151676 | || |||||||| || ||||||||||| || || | ||| ||||||| ||||| |||| Sbjct 305 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCA 246 Query 151677 ACCTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACA 151736 | | || |||||||| || ||||| || | | ||| |||| || || | || | Sbjct 245 ATTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 186 Query 151737 CCTGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 151796 ||||||| || || | |||||||| || ||||||||||||||||| || ||||||| Sbjct 185 CCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 126 Query 151797 CTCACAACTTCCCTCTCGACCTTGCTGC 151824 |||| || |||||||| ||||| ||||| Sbjct 125 CTCATAATTTCCCTCTAGACCTAGCTGC 98 >seq65592 Length=292 Score = 168 bits (186), Expect = 7e-37 Identities = 162/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 153164 CTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAA 153223 || ||||| | | ||||| || || || || ||||| || || ||||| |||||||||| Sbjct 4 CTCTTGGAGTAGTCGGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAA 63 Query 153224 TCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTTTGAACG 153283 || | || |||||||||||||||||||||| ||||| || || ||||| || || |||| Sbjct 64 TCCGCGCAGCAGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACG 123 Query 153284 AAGGTCTTCGTGCTTGGTTGGCACCTGTTGACCAACCTCATGAGAACTTCGTGTTCCCTG 153343 ||||| ||||||| ||| |||| || || || |||||||| ||| | | ||||||| Sbjct 124 AAGGTATTCGTGCGTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTG 183 Query 153344 AAGAGGTATTGCCACGAGGCAACGCTCT 153371 | ||||| | ||||| || |||||||| Sbjct 184 AGGAGGTTCTACCACGTGGAAACGCTCT 211 >seq70055 Length=284 Score = 131 bits (144), Expect = 2e-25 Identities = 174/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 152359 TTTGATGTCCTGGATGACTGGCTTAAGAGAGACCGTTTCGTTTTTGTTGGTTGGTCTGGA 152418 |||||| | ||||||||||| | ||| |||||||| |||||||| |||||||| || Sbjct 242 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTGGGTTGGTCCGGT 183 Query 152419 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 152478 || | || ||||| || ||| |||| | || |||||| | || || || || || Sbjct 182 CTATTGCTCTTTCCTTGCGCCTATTTTGCCGTGGGGGGTTGGTTCACAGGTACCACCTTT 123 Query 152479 GCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTT 152538 | || ||||||||||| || ||||||||||||||| |||| || ||||| | Sbjct 122 GTAACTTCATGGTATACTCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 63 Query 152539 ACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGT 152598 ||||| ||||| |||||||| || || | | | || ||| | || | || |||||| Sbjct 62 ACTGCAGCAGTCTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGT 3 Query 152599 CC 152600 || Sbjct 2 CC 1 >seq67767 Length=213 Score = 113 bits (124), Expect = 5e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 152638 GGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTT 152697 || || || ||| ||||||| || || ||||| ||||||| |||| ||||| ||| | Sbjct 27 GGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCTTTCGGATTAATAGGTTTTATGTTA 86 Query 152698 CGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTC 152756 || || |||||||| || || ||| || | | || || || ||||| || || ||||| Sbjct 87 CGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGGCCTTATAATGCAATCGCATTCTC 145 Query 152757 TGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTG 152816 ||||| || |||||||||||| ||||| || || || || ||||| || || |||| Sbjct 146 CGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTGATTTATCCACTGGGCCAGTCTGGTTG 205 Query 152817 GTTTTT 152822 ||| || Sbjct 206 GTTCTT 211 >seq47049 Length=776 Score = 107 bits (118), Expect = 2e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 152018 TGCTGAGGAACAAGGAGTTGATATGAACTACTCTTGTCGTGCTGGTGCATGTTCCTCTTG 152077 |||||| ||| ||| ||||| | ||||| || | |||||| | ||||| || || Sbjct 453 TGCTGAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATG 394 Query 152078 TGCTGGTAAGATTGTGAGTGGTACAGTTGATCAGAGTGACCAATCATTCTTGGATGATGA 152137 ||||||||| |||| ||||| ||||||||| ||| || ||| | |||||||| Sbjct 393 TGCTGGTAAAGTTGTTGGTGGTGAAGTTGATCAATCTGATGGTTCTTTCCTTGATGATGA 334 Query 152138 CCAGATTGAATCAGGATTCGTGCTGACCTGTGTTGCATATCCAACTTCTGATGT 152191 |||||||||| || || || || || |||||||| ||||| | |||||||| Sbjct 333 CCAGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCCTAAGTCTGATGT 280 >seq56135 Length=966 Score = 96.9 bits (106), Expect = 4e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 152004 TACATCTTGGATGCTGCTGAGGAACAAGGAGTTGATATGAACTACTCTTGTCGTGCTGGT 152063 |||||| | ||||| || ||| | ||| ||||| | ||||| || |||||||| Sbjct 377 TACATCCTAGATGCAGCGGAGAATGCAGGGGTTGAACTCCCTTACTCGTGCCGTGCTGGA 436 Query 152064 GCATGTTCCTCTTGTGCTGGTAAGATTGTGAGTGGTACAGTTGATCAGAGTGACCAATCA 152123 || || || |||||||||| ||| |||| ||| |||| ||||| ||| || Sbjct 437 GCGTGCTCTACTTGTGCTGGAAAGGTTGTTTCTGGCTCAGTCGATCAATCTGATGGCTCT 496 Query 152124 TTCTTGGATGATGACCAGATTGAATCAGGATTCGTGCTGACCTGTGTTGCATATCCAACT 152183 |||||||| ||| || || | ||| || ||||| ||||||||| ||||||||||| Sbjct 497 TTCTTGGACGATACTCAACTTAAGGAAGGCTTTGTGCTTACCTGTGTTTCATATCCAACT 556 Query 152184 TCTGAT 152189 ||||| Sbjct 557 GCTGAT 562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549109471765480