Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq25475 181 1e-39 >seq25475 Length=2349 Score = 181 bits (200), Expect = 1e-39 Identities = 216/293 (74%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 || ||||| |||||||| ||||||||||| ||||| ||||| | | |||||| | |||| Sbjct 1833 GAATGGATATTCTCGATTGCGATCTGGAATCCGTAGAAGGCACGCGCCTCTGAGATTTGG 1892 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 | || |||||||| | ||||| || ||||| ||||| |||||| |||||| || Sbjct 1893 ATTTCTTTCATGAATCTTCCGGCGAGATTCTCCAAGACGATTCCGTCGGAGGCGGCAAAG 1952 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || ||||| ||| | |||||||||||| ||||| |||| || | |||||| | Sbjct 1953 AAGGCAAGGACATGCGAAACAAAGTGGCGCTCACCGTCGGTGAGGGAGATCCAGTGCTGG 2012 Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872 | || | ||| || || || ||||||||||||| ||||| ||||| || |||||| Sbjct 2013 TTATCTTGGGAGAGATCGACTTCTTCGGCGGTCCAGAAAGAGGCTTCGGCTTTCTTGTAC 2072 Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTT 869925 || ||||| | || |||| |||| ||||| | | || |||| ||||| Sbjct 2073 ATTTCCCAGATTTTAGGGTATTGGATTGGGAACATGCAGAAACGGTCTGGGTT 2125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6101012332831903