Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq56144 154 1e-32 seq56145 149 6e-31 seq56143 149 6e-31 seq34025 116 3e-21 seq48696 114 1e-20 seq2805 109 5e-19 seq53415 105 6e-18 seq48430 100 3e-16 seq2799 96.9 3e-15 seq62831 87.8 2e-12 seq60038 87.8 2e-12 seq17518 84.2 2e-11 seq17517 84.2 2e-11 >seq56144 Length=1637 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| |||||||||||||| || || || || || ||| || || Sbjct 1206 ATGCAAATCTTTGTGAAAACCCTAACCGGTAAAACCATAACCCTAGAGGTTGAATCCTCC 1147 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||| |||||||| || ||||| ||||||||||| Sbjct 1146 GACACCATCGACAACGTGAAAGCTAAGATTCAAGACAAGGAGGGAATTCCTCCCGATCAG 1087 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||||||| |||||| |||| || ||| | | | || || ||| Sbjct 1086 CAGCGGTTGATCTTTGCCGGAAAACAGTTGGAAGACGGCCGAACCCTAGCCGACTACAAC 1027 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || |||||||| || || ||| |||| | || | ||||| ||| Sbjct 1026 ATACAGAAGGAATCAACGCTCCACCTGGTACTCCGTCTCCGCGGCGGC 979 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| |||||||| ||||| || || || || || ||| || | Sbjct 978 ATGCAAATCTTCGTGAAAACCCTAACCGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||| |||||||||||||| ||||| |||||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || || |||||||| ||||| | | |||||||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || || || || || ||||| | || |||| ||||| Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGTTCTTCGCCTGCGTGGAGG 752 >seq56145 Length=1576 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| |||||||| ||||| || || || || || ||| || | Sbjct 978 ATGCAAATCTTCGTGAAAACCCTAACCGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||| |||||||||||||| ||||| |||||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || || |||||||| ||||| | | |||||||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || || || || || ||||| | || |||| ||||| Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGTTCTTCGCCTGCGTGGAGG 752 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 24799 CAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 ||| || ||||| ||||||||||| || || |||||||||||||| |||||| |||| || Sbjct 1111 CAAGGAGGGAATTCCTCCCGATCAGCAGCGGTTGATCTTTGCCGGAAAACAGTTGGAAGA 1052 Query 24859 TTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| | | | || || ||||| || |||||||| || || ||| |||| | || Sbjct 1051 CGGCCGAACCCTAGCCGACTACAACATACAGAAGGAATCAACGCTCCACCTGGTACTCCG 992 Query 24919 ATTGCGCGGAGGC 24931 | ||||| ||| Sbjct 991 TCTCCGCGGCGGC 979 >seq56143 Length=1408 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||||||||| || ||||| || || || || || ||| || | Sbjct 978 ATGCAAATCTTCGTCAAAACGCTAACTGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||| |||||||||||||| ||||| |||||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || || |||||||| ||||| | | |||||||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || || || || || ||||| | || |||| ||||| Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGTTCTTCGCCTGCGTGGAGG 752 >seq34025 Length=456 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | ||||| || || ||||| | || |||||| | Sbjct 133 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATTACCTTAGAGGTAGAAAGTTCA 192 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || ||||| || |||||||| || ||||| || || ||||| Sbjct 193 GACACCATTGATAACGTGAAGGCAAAA-ATACAAGACAAGGAGGGAATCCCACCAGATCA 251 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||| || |||||||| || ||| |||| || | ||||| || Sbjct 252 GCAGAGGTTGATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACAA 311 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || || ||||| || || || | ||||||||| | || || || Sbjct 312 CATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCGACTTCGTGGTGG 359 >seq48696 Length=1151 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| |||| ||||| ||||| ||||| || || ||||| || || | Sbjct 305 ATGCAGATCTTTGTTAAGACGCTCACCGGGAAAACCATCACCCTCGAGGTTGAGAGTTCT 364 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| || || |||||||| ||||| ||||| Sbjct 365 GATACCATCGACAACGTGAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCGGATCAG 424 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||| || || |||||||| || || | | | ||||| || Sbjct 425 CAGAGGTTGATCTTTGCGGGTAAGCAGCTGGAAGACGGAAGGACTCTTGCTGATTACAAT 484 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| || ||| | ||| |||| || | || ||| Sbjct 485 ATCCAGAAGGAGTCGACCCTTCACCTTGTGCTGCGTCTGAGGGGTGGC 532 >seq2805 Length=580 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || |||| || || || || || || || || |||||||| || | Sbjct 256 GATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAGTTC 315 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || |||| | || || ||||| |||||||| ||||| || || |||||||| Sbjct 316 AGATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCGCCCGATCA 375 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | | |||||||| || |||||||| || ||| |||| || | ||||| || Sbjct 376 ACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACAA 435 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || || ||||| || || || | ||||||||| | || || || Sbjct 436 CATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCGACTTCGTGGTGG 483 >seq53415 Length=940 Score = 105 bits (116), Expect = 6e-18 Identities = 119/157 (76%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| || || || || || ||||| || || | | Sbjct 154 GATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTCGAGGTTGAGTCTTC 213 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 |||||| | || |||| || || |||||||||||||| || || || ||||| |||| Sbjct 214 CGACACCATCGACAACGTCAAGAC-CAAGATCCAAGACAAGGAGGGGATTCCTCCAGATC 272 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 | || ||| | ||||| |||||||| ||| |||| || Sbjct 273 AGCAGCGTCTCATCTTCGCCGGGAAGCAGTTGGAAGA 309 >seq48430 Length=787 Score = 100 bits (110), Expect = 3e-16 Identities = 132/182 (73%), Gaps = 1/182 (1%) Strand=Plus/Plus Query 24730 CGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAA 24789 ||| ||||| || || ||||| || || || |||||| | || | || || || Sbjct 1 CGGGAAAACCATCACCCTCGAGGTCGAGAGCAGCGACACCATCGACAATGTCAAGACCAA 60 Query 24790 GATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACA 24849 ||| |||||||||||||| || ||||| ||||| || |||||||| || ||||| || || Sbjct 61 GATTCAAGACAAAGAAGGTATCCCTCCGGATCAGCAGCGTTTGATTTTCGCCGGTAAGCA 120 Query 24850 GCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA-CT 24908 ||| || ||| | | | || | ||||| || || || |||||||| || || || || Sbjct 121 GCTTGAAGATGGACGCACCTTGGCCGATTACAATATCCAGAAGGAATCTACTCTTCATCT 180 Query 24909 TG 24910 || Sbjct 181 TG 182 >seq2799 Length=391 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || || || || || || || || || || || || | Sbjct 67 GATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATCACCCTTGAGGTTGAGAGTTC 126 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || ||||| ||||||||||| || || || || ||||| Sbjct 127 TGACACAATTGACAATGTGAAGGCCAAGATACAAGACAAAGAGGGTATCCCACCGGATCA 186 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | |||||||| || |||||||| || ||| ||| || | |||||||| Sbjct 187 GCAGAGGCTTATCTTTGCTGGAAAACAGCTCGAAGATGGCCGAACTCTGGCCGATTATAA 246 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||| || || || | || | || ||| | ||||| Sbjct 247 TATTCAGAAGGAATCCACCCTTCATCTTGTCCTACGTTTGAGGGGAGG 294 >seq62831 Length=874 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/142 (75%), Gaps = 7/142 (5%) Strand=Plus/Plus Query 24797 GACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAG 24856 ||||| ||||| || ||||| || || || | ||||| |||||||| || |||||||| Sbjct 2 GACAAGGAAGGTATCCCTCCTGACCAGCAGAGGTTGATTTTTGCCGGTAAGCAGCTGGAA 61 Query 24857 GAT--TCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGT 24914 ||| ||| | | || | ||||||||||||||||| ||||| || || |||||||| Sbjct 62 GATGGTCGC-ACTCTTG-CTGATTATAACATTCAAAAAGAATCAACGCTTCACTTGGTCC 119 Query 24915 TGCGATTGCGCGGAGGCGGAAC 24936 || | || | |||| ||||| Sbjct 120 TGAG---GCTCAGAGGAGGAAC 138 >seq60038 Length=254 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | ||||| || ||||| || ||||| || || || || || | | Sbjct 125 GATGCAGATCTTTGTGAAAACCCTTACCGGCAAGACTATCACCCTTGAGGTGGAGTCAAG 184 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || ||| |||||| || ||||||||||| || ||||| ||||| Sbjct 185 CGACACCATCGACAATGTCAAAGCAAAGATTCAGGACAAAGAAGGGATTCCTCCGGATCA 244 Query 24823 ACA 24825 || Sbjct 245 GCA 247 >seq17518 Length=2997 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 138150 AGATTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACAT 138209 |||| |||| ||||||||||| ||||||||| || | | |||| || || ||||| Sbjct 2591 AGATGTATCAACAGTAAACTTGATGGCATCACTTGCAGCTCGGGTTCGGAGGTAGTACAT 2532 Query 138210 TCCCGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGT 138269 || || || || || || ||| || || | |||| ||||| | | || | Sbjct 2531 ACCAGTCTTCAAACCCTTAGACCACGCATAAAAATGTAGGGAAGTCAACTTTCCAAAATT 2472 Query 138270 CGGTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAAT 138329 ||||| ||| |||||| || |||||||||||| ||| | |||||||||| Sbjct 2471 AGGTTTATCCATGTGTATGTTTAAGCTTTGACTCTGATCTATGTAGCATCCTCGATCAAC 2412 Query 138330 GGCCATGTTAATTAA-AT-TTTTACTTTTCATCTCCCACACGGTCTTGTATA 138379 |||||||| || || || |||| | || |||||||| || || || |||| Sbjct 2411 GGCCATGTCAACCAATATCTTTTGC--TTGATCTCCCAAACAGTTTTATATA 2362 >seq17517 Length=2996 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 138150 AGATTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACAT 138209 |||| |||| ||||||||||| ||||||||| || | | |||| || || ||||| Sbjct 2590 AGATGTATCAACAGTAAACTTGATGGCATCACTTGCAGCTCGGGTTCGGAGGTAGTACAT 2531 Query 138210 TCCCGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGT 138269 || || || || || || ||| || || | |||| ||||| | | || | Sbjct 2530 ACCAGTCTTCAAACCCTTAGACCACGCATAAAAATGTAGGGAAGTCAACTTTCCAAAATT 2471 Query 138270 CGGTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAAT 138329 ||||| ||| |||||| || |||||||||||| ||| | |||||||||| Sbjct 2470 AGGTTTATCCATGTGTATGTTTAAGCTTTGACTCTGATCTATGTAGCATCCTCGATCAAC 2411 Query 138330 GGCCATGTTAATTAA-AT-TTTTACTTTTCATCTCCCACACGGTCTTGTATA 138379 |||||||| || || || |||| | || |||||||| || || || |||| Sbjct 2410 GGCCATGTCAACCAATATCTTTTGC--TTGATCTCCCAAACAGTTTTATATA 2361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449477738688520