Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq2804 107 3e-18 seq2803 105 1e-17 seq2802 105 1e-17 seq56145 93.3 7e-14 seq56144 93.3 7e-14 seq56143 93.3 7e-14 seq33732 91.5 2e-13 seq2805 87.8 3e-12 seq2799 87.8 3e-12 >seq2804 Length=712 Score = 107 bits (118), Expect = 3e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | || ||||| || || || |||| || || | Sbjct 486 TGCAAATCTTTGTGAAAACTCTCACTGGAAAGACCATCACCCTTGAGGTCGAGAGCTCTG 545 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| || || || |||||| |||||||||||||| |||| Sbjct 546 ATACCATTGACAATGTCAAAGCCAAGATTCAGGATAAAGAGGGCATTCCACCCGACCAAC 605 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || || ||||| || ||||| | || ||| ||||| ||| ||||||| || | Sbjct 606 AGAGGCTTATCTTTGCTGGCAAACAGCTTGAGGATGGCAGAACTTTAGCAGATTACAACA 665 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || ||||| || ||| ||||| | || || || Sbjct 666 TTCAGAAAGAGTCAACTCTCCATCTTGTGTTGCG 699 >seq2803 Length=533 Score = 105 bits (116), Expect = 1e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || ||||| || || ||| | || |||||| | | Sbjct 420 TGCAAATTTTTGTCAAGACCCTTACCGGAAAGACCATAACTTTGGAGGTAGAAAGTTCTG 361 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || | |||||| || ||||| || ||||| || || || | Sbjct 360 ATACAATTGATAATGTGAAGACTAAAATTCAGGACAAAGAGGGAATTCCTCCAGACCAGC 301 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| ||||| ||||| || ||| | | || | | |||||||||| Sbjct 300 AGAGGCTAATTTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTGGCTGATTATAATA 241 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 |||| || ||||| ||| | ||| Sbjct 240 TACAGAAGGAATCTACTCTGCAT 218 >seq2802 Length=1024 Score = 105 bits (116), Expect = 1e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || ||||| || || ||| | || |||||| | | Sbjct 911 TGCAAATTTTTGTCAAGACCCTTACCGGAAAGACCATAACTTTGGAGGTAGAAAGTTCTG 852 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || | |||||| || ||||| || ||||| || || || | Sbjct 851 ATACAATTGATAATGTGAAGACTAAAATTCAGGACAAAGAGGGAATTCCTCCAGACCAGC 792 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| ||||| ||||| || ||| | | || | | |||||||||| Sbjct 791 AGAGGCTAATTTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTGGCTGATTATAATA 732 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 |||| || ||||| ||| | ||| Sbjct 731 TACAGAAGGAATCTACTCTGCAT 709 >seq56145 Length=1576 Score = 93.3 bits (102), Expect = 7e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || ||||| || || ||||||||| | || || || | | Sbjct 749 TGCAGATTTTTGTCAAGACTTTAACGGGTAAGACAATTACTTTGGAGGTGGAGAGTTCGG 690 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| ||| || || || ||| ||||| || ||||| ||||||| Sbjct 689 ATACTATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAAGGGATACCACCTGATCAAC 630 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| ||||||||| | || ||| | || | | |||||||||| Sbjct 629 AGCGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGACGCACTCTTGCTGATTATAATA 570 Query 146212 TACAAAAAGAATCGAC 146227 | || || ||||| || Sbjct 569 TTCAGAAGGAATCTAC 554 >seq56144 Length=1637 Score = 93.3 bits (102), Expect = 7e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || ||||| || || ||||||||| | || || || | | Sbjct 749 TGCAGATTTTTGTCAAGACTTTAACGGGTAAGACAATTACTTTGGAGGTGGAGAGTTCGG 690 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| ||| || || || ||| ||||| || ||||| ||||||| Sbjct 689 ATACTATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAAGGGATACCACCTGATCAAC 630 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| ||||||||| | || ||| | || | | |||||||||| Sbjct 629 AGCGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGACGCACTCTTGCTGATTATAATA 570 Query 146212 TACAAAAAGAATCGAC 146227 | || || ||||| || Sbjct 569 TTCAGAAGGAATCTAC 554 >seq56143 Length=1408 Score = 93.3 bits (102), Expect = 7e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || ||||| || || ||||||||| | || || || | | Sbjct 749 TGCAGATTTTTGTCAAGACTTTAACGGGTAAGACAATTACTTTGGAGGTGGAGAGTTCGG 690 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| ||| || || || ||| ||||| || ||||| ||||||| Sbjct 689 ATACTATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAAGGGATACCACCTGATCAAC 630 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| ||||||||| | || ||| | || | | |||||||||| Sbjct 629 AGCGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGACGCACTCTTGCTGATTATAATA 570 Query 146212 TACAAAAAGAATCGAC 146227 | || || ||||| || Sbjct 569 TTCAGAAGGAATCTAC 554 >seq33732 Length=802 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | |||||||| || ||||| | || || || | | Sbjct 480 TGCAAATCTTTGTCAAAACCCTTACAGGAAAGACCATTACACTAGAGGTGGAGAGTTCAG 539 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | ||||| || || || || ||||| ||||||||||| || |||| Sbjct 540 ACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATTCCACCGGACCAAC 599 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||| ||||| || ||||| | || ||| ||||| || | ||||| || | Sbjct 600 AGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACAACA 659 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || |||||||| || ||||| | || || ||| | | || |||| Sbjct 660 TCCAGAAAGAATCCACCCTCCATCTTGTGTTGCGACTTCGTGGTGGTA 707 >seq2805 Length=580 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || || || || || ||| | || || || | | Sbjct 258 TGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAGTTCAG 317 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||| || || || ||| || ||||| || || |||||||||| Sbjct 318 ATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCGCCCGATCAAC 377 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||| ||||| || ||||| | || ||| ||||| || | ||||| || | Sbjct 378 AGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACAACA 437 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || |||||||| || ||||| | || || ||| | | || |||| Sbjct 438 TCCAGAAAGAATCCACCCTCCATCTTGTGTTGCGACTTCGTGGTGGTA 485 >seq2799 Length=391 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || || | |||||||| || || || |||| || || | | Sbjct 69 TGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATCACCCTTGAGGTTGAGAGTTCTG 128 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || || |||||| ||||| || || ||||| ||||| | Sbjct 129 ACACAATTGACAATGTGAAGGCCAAGATACAAGACAAAGAGGGTATCCCACCGGATCAGC 188 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || || ||||| || ||||| | || ||| |||| | | |||||||||| Sbjct 189 AGAGGCTTATCTTTGCTGGAAAACAGCTCGAAGATGGCCGAACTCTGGCCGATTATAATA 248 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || ||||| || | ||| | || |||| || || ||||||| Sbjct 249 TTCAGAAGGAATCCACCCTTCATCTTGTCCTACGTTTGAGGGGAGGTA 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785432720034280