Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq63568 508 7e-139 seq47049 138 1e-27 seq65592 134 2e-26 seq67767 116 4e-21 seq70055 113 5e-20 seq48549 96.9 4e-15 seq63660 89.7 6e-13 >seq63568 Length=1222 Score = 508 bits (562), Expect = 7e-139 Identities = 695/964 (72%), Gaps = 5/964 (1%) Strand=Plus/Minus Query 177585 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 177644 ||||| || || | || ||||| || || ||||||| || || | ||| | |||||| Sbjct 1056 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 997 Query 177645 ATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGACATCGACGGCATCCGTGA 177703 |||| || || |||| ||| | ||||| || || || || || || || || ||||| Sbjct 996 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 938 Query 177704 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATC 177763 || || |||| || || | || || ||||| || || |||||||| || | || | Sbjct 937 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 878 Query 177764 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 177823 ||| || || ||| | ||||| || || || |||||||| ||||| ||||||| || Sbjct 877 TTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAATG 818 Query 177824 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGC 177883 | | || || |||||||||| |||| | || | |||||| | | || | | Sbjct 817 GTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 758 Query 177884 ATATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTGGATCTGTGT 177943 || ||||| ||||||||||||||| | ||||| ||||||||||| ||||| ||| Sbjct 757 TTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCTGT 698 Query 177944 TGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTAG-TCTATCCTTTCGGTC 178002 |||||| || || || || ||||| || | ||||| ||||| | |||| || | |||| Sbjct 697 TGCATATTCAGCTCCCGTCGCAGCTGCTACTGCAGT-TTTCTTGATCTACCCAATTGGTC 639 Query 178003 AAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTG 178062 |||| || || |||| ||||||||| || |||||||||||||| |||| ||| ||| Sbjct 638 AAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTG 579 Query 178063 TATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGG 178122 |||| || || || || ||||| ||||||||||| || |||||| | ||||| ||||| | Sbjct 578 TATTTCAGGCTGAGCATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTG 519 Query 178123 TATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCC 178182 ||||||| || || || ||| ||||||||| || | || |||||| | || Sbjct 518 TATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCA 459 Query 178183 GTGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAA 178242 | || || ||||||| ||| || || | ||||||| ||||| ||||| ||||||| Sbjct 458 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAA 399 Query 178243 CATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGT 178302 | ||||| || || || || || ||||| || || || ||||||||||||||||| | Sbjct 398 CCTATAATATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 339 Query 178303 TCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGT 178362 ||||||| || || || | || |||||||| || || ||||||||||| || ||||||| Sbjct 338 TCAACAATTCTCGCTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGT 279 Query 178363 TCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGT 178422 | ||||| | ||| | ||| ||||| || || | ||||| ||||| || ||||| | Sbjct 278 TTACCGCGTTAGGTATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAACCAAT 219 Query 178423 CCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCG 178482 | | | || | ||||| ||||| | || || ||||| || | | |||||||| Sbjct 218 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTA 159 Query 178483 GTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACTTCCCGCTTGATCTTGCA 178542 || || |||||||| ||||| ||| | ||| || ||||| ||||| || || || || Sbjct 158 ACCTTGGTATGGAAGTTATGCATGAACGTAAT-GCTCATAATTTCCCTCTAGACCTAGCT 100 Query 178543 GCAG 178546 |||| Sbjct 99 GCAG 96 >seq47049 Length=776 Score = 138 bits (152), Expect = 1e-27 Identities = 174/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 138517 TTTGACTGTGCTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTT 138576 ||||| ||| | |||||| ||||| ||||| |||||| |||| || |||||||| Sbjct 488 TTTGAATGTCCAGATGATGTTTACATTCTTGACCATGCTGAAGAAGTTGGAATTGATCTC 429 Query 138577 CCCTACTCCTGTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACT 138636 || ||||| || | |||||| | |||||| | |||||||||||| | |||| || Sbjct 428 CCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATGTGCTGGTAAAGTTGTTGGTGGTGAA 369 Query 138637 GTAGATCAGTCTGACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATG 138696 || ||||| ||||| |||||||||||||||||||| |||| || || ||| | | Sbjct 368 GTTGATCAATCTGATGGTTCTTTCCTTGATGATGACCAGATTGAAGGTGGTTTTGTTCTT 309 Query 138697 ACTTGCGTAGCATACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACT 138755 ||||| || || || || | || ||| | | ||||| ||| | || || || ||||| Sbjct 308 ACTTGTGTTGCTTATCCTAAGTCTGATGTTGTTATTGAGACTCACAAGGAAGAAGAACT 250 >seq65592 Length=292 Score = 134 bits (148), Expect = 2e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 179758 GGGCTAGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAA 179817 || || || || || || ||||| ||||| ||||| |||||| ||| | ||||||||| Sbjct 18 GGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCAGAA 77 Query 179818 GATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGCT 179877 |||||||| || ||||| ||||| || || || ||||| | || ||||| | ||||| Sbjct 78 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 137 Query 179878 TGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACCT 179937 ||| |||| || ||||| || ||||||||| | || ||||| || || || ||||| Sbjct 138 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 197 Query 179938 AGTGGTAACGCACT 179951 |||| ||||| || Sbjct 198 CGTGGAAACGCTCT 211 >seq67767 Length=213 Score = 116 bits (128), Expect = 4e-21 Identities = 149/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 179203 CGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTA 179262 || ||||| ||| | || || || |||| ||| || ||||| |||||||| |||| || Sbjct 12 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCTTTCGGATTA 71 Query 179263 ATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCTTACAA 179321 || || || ||| | ||||| |||||||| || || ||| || | | || ||||| || Sbjct 72 ATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGGCCTTATAA 130 Query 179322 TGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTTCTCATCTACCCACT 179381 ||| || || || | ||||| ||||| || || ||| ||| || || || || ||||| Sbjct 131 TGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTGATTTATCCACT 190 Query 179382 TGGACAATCCAGTTGGTTCTTTG 179404 || || || |||||||||||| Sbjct 191 GGGCCAGTCTGGTTGGTTCTTTG 213 >seq70055 Length=284 Score = 113 bits (124), Expect = 5e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 ||||||||||| | |||| || ||||| |||||||||||||| || || | || Sbjct 232 TGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTGGGTTGGTCCGGTCTATTGCTCT 173 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| || ||| ||||| | || |||||| | || || || | ||||| || | Sbjct 172 TTCCTTGCGCCTATTTTGCCGTGGGGGGTTGGTTCACAGGTACCACCTTTGTAACTTCAT 113 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 179128 |||| || ||||| | || ||||||||| | |||||| |||||| | || ||||| | Sbjct 112 GGTATACTCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTAACTGCAGCAG 53 Query 179129 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 179180 |||| || |||||| || | | | || ||| | | |||| |||||||| Sbjct 52 TCTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGTCC 1 >seq48549 Length=1056 Score = 96.9 bits (106), Expect = 4e-15 Identities = 167/239 (70%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 138538 TACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGT 138597 ||||| || ||| | ||||| || || || | || || || ||||| || | |||||| Sbjct 645 TACATTCTGGATTCAGCTGAGGAGGCTGGAGTGGAGCTACCTTACTCATGCAGAGCTGGT 586 Query 138598 GCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTCT 138657 ||||| ||||| ||||| || |||| | | | || | || ||||||||||| |||||| Sbjct 585 GCATGCTCTACTTGTGCCGGACAATTGGATAAGGGTTCGGTGGATCAGTCTGATCAGTCT 526 Query 138658 TTCCTTGATGATGACCAAATTGCAGCA-GGATTTATCATGACTTGCGTAGCATACCCCAC 138716 || || ||||| | ||||||| || | || | | | | || || || | ||||| | Sbjct 525 TTTCTCGATGACCAGCAAATTG-AGAAGGGCTATCTTCTCACATGTGTTTCGTACCCGAA 467 Query 138717 ATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTATACTGATGGAGTTTACACA 138775 ||| || | ||| | ||| | || ||||| | ||| |||| | || ||| |||| Sbjct 466 ATCAGACACCGTGATTTACACTCACAAGGAGGAAGCACTCTACTAAGTGA-TTTTCACA 409 >seq63660 Length=616 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138529 GATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGT 138588 ||| || |||| || ||||| || || || ||| ||| |||||||||| ||||| || Sbjct 232 GATAATGAGTATATTCTTGACGCGGCCGAGGAACAAGGCCTTGATCTTCCATACTCGTGC 291 Query 138589 CGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCT 138648 | || ||||| |||||| | |||||||| ||| | |||| || ||| | || Sbjct 292 AGGGCCGGTGCTTGTTCTTCGTGTGCTGGAAAAGTTACACAAGGGGAAGTGGATAATTCA 351 Query 138649 GACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCA 138708 || | |||||||||||||| || | ||||| || ||| | | || || || || Sbjct 352 GATAATAGCTTCCTTGATGATGATCAGTTAGCAGCTGGGTTTGTTCTCACATGTGTCGCC 411 Query 138709 TACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACT 138755 ||||| || ||| | | ||||| || | || ||||| ||||| Sbjct 412 TACCCTCGTTCGGATATTGTTATTGAGACACACAAGGAGGAAGAACT 458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605101968656440