Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq34025 107 2e-18 seq33732 95.1 1e-14 seq2805 95.1 1e-14 seq2801 91.5 1e-13 seq56145 86.0 6e-12 seq56144 86.0 6e-12 seq48430 84.2 2e-11 >seq34025 Length=456 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 ||||| || | ||| | || |||||||| || |||||||||||| || || || Sbjct 347 CGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGCCA 288 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 |||||||| ||||| |||||| |||||| | |||||||| || || || || || ||| Sbjct 287 TCTTCGAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTG 228 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || |||||| || | | || | ||||||| |||||| || | || | Sbjct 227 TCTTGTATTTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCTACCTCTAAGGTAATG 168 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415 ||||| |||||||| || || ||||| || |||||| || Sbjct 167 GTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCATACCT 129 >seq33732 Length=802 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | |||||||||| || ||||| || || ||||||||||| Sbjct 477 CCACCACGGAGACGGAGCACTAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCA 418 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | | || || ||||| ||||||||| | || ||||| |||||||| ||||| Sbjct 417 AGGGTACGCCCATCCTCTAGTTGCTTACCAGCAAAAATGAGACGCTGCTGATCTGGAGGG 358 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || || || ||||| ||| || || | | || | || |||| || ||| Sbjct 357 ATCCCCTCCTTGTCTTGAATCTTGGACTTAACATTGTCTATGGTATCTGAACTCTCAACT 298 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| ||| | |||||||| |||| || || || || |||||||| Sbjct 297 TCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATTTGCAT 251 >seq2805 Length=580 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 ||||| || | ||| | || |||||||| || |||||||||||| || || || Sbjct 471 CGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGCCA 412 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 |||||||| ||||| |||||| |||| || | || |||||||| || || ||||| ||| Sbjct 411 TCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGATCGGGCGGGATCCCTTCCTTG 352 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || || | | || | || |||| || ||||| | ||| | Sbjct 351 TCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATG 292 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||||||| || | || || ||||| |||||||| Sbjct 291 GTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCAT 257 >seq2801 Length=469 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 137209 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 137268 |||| || ||||| || || ||||||||||| | |||| ||||| | |||| Sbjct 275 TGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGACCATCTTCCAATTGT 216 Query 137269 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 137328 || |||||| |||| || | ||||||||| ||||| || ||||| || || ||||| Sbjct 215 TTCCCAGCAAAGATAAGCCTTTGCTGATCAGGAGGAATACCTTCCTTATCTTGGATTTTA 156 Query 137329 TGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 137388 ||| | | || | || || | || || |||| ||| | || ||||||||| Sbjct 155 GATTTCACGTTGTCTATGGTATCAGAACTCTCCACCTCAAGAGTGATAGTTTTGCCGGTC 96 Query 137389 AATGTTTTTACGAATATTTGCAT 137411 |||||||| || || |||||||| Sbjct 95 AATGTTTTCACAAAGATTTGCAT 73 >seq56145 Length=1576 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || | || | ||| ||||| | ||||| ||||| || || || ||||| Sbjct 752 CCTCCACGCAGGCGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCA 811 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || ||| ||| || ||||| || || ||| |||||| || || ||||| ||||| Sbjct 812 AGAGTTCTCCCGTCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGA 871 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| || || || | | || | ||||| | || ||| || Sbjct 872 ATTCCTTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACC 931 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | || || ||||| | ||||| ||||| |||||||| Sbjct 932 TCCAGTGTGATGGTTTTTCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 >seq56144 Length=1637 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || | || | ||| ||||| | ||||| ||||| || || || ||||| Sbjct 752 CCTCCACGCAGGCGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCA 811 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || ||| ||| || ||||| || || ||| |||||| || || ||||| ||||| Sbjct 812 AGAGTTCTCCCGTCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGA 871 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| || || || | | || | ||||| | || ||| || Sbjct 872 ATTCCTTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACC 931 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | || || ||||| | ||||| ||||| |||||||| Sbjct 932 TCCAGTGTGATGGTTTTTCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 >seq48430 Length=787 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/118 (77%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 137202 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTT 137260 ||| | ||||| |||||||| || || || ||||||||| || |||| || | |||| Sbjct 184 AACAAGATGAAGAGTAGATTCCTTCTGGATATTGTAATCGGCCAAGGTGCGTCCA-TCTT 126 Query 137261 CGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 | || || ||||| || | |||| ||| |||||||| ||||| || ||||||||||| Sbjct 125 CAAGCTGCTTACCGGCGAAAATCAAACGCTGCTGATCCGGAGGGATACCTTCTTTGTC 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488088072418800