Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq48933 107 6e-18 >seq48933 Length=1441 Score = 107 bits (118), Expect = 6e-18 Identities = 243/363 (67%), Gaps = 8/363 (2%) Strand=Plus/Plus Query 188735 ATGATGATGGAGTAAAGATCAAAAAATCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAG 188794 ||||||||| ||| | | | ||| |||| | ||||| | || || ||||| |||| Sbjct 14 ATGATGATGAAGTTGAACTTGAGAAAAGTAATATCCTTTTGATGGGGCCAACTGGATCAG 73 Query 188795 GTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTAGCTATCTCTG 188854 | || |||||| ||||| |||| |||||| | | || |||| || | | ||| | | Sbjct 74 GGAAGACATTACTTGCTAAAACCTTGGCTAAGTTTGTAAATGTTCCCTTTGTTATTGCAG 133 Query 188855 ATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTC 188914 | |||||| | | || | ||||||||||| || ||||||||||| | |||| Sbjct 134 ACGCAACTACACTCACTCAGGCTGGTTATGTTGGAGAAGATGTGGAGTCCATATTATACA 193 Query 188915 GTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCG 188974 | || || || ||||| | | | | || | | || ||||| || || | Sbjct 194 AGCTCCTCATGGCTGCAGATTATAACGTGGCAGCTGCTCAGCAAGGCATTGTTTACATTG 253 Query 188975 ATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGC----ACATCCATTACCCGAGATGTA 189030 ||||||| || || ||| | | ||| || || ||| | || || || ||||||| Sbjct 254 ATGAAGTTGACAAGATTACCAAAAAGTCTGAGAGCCTTAATAT-CAGTA---GAGATGTC 309 Query 189031 TCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTT 189090 ||||| ||||| || ||||| || ||| | || || |||| || || |||| || ||| Sbjct 310 TCTGGTGAAGGTGTTCAGCAGGCATTACTGAAGATGCTTGAGGGAACGGTTGTCAATGTT 369 Query 189091 CCT 189093 ||| Sbjct 370 CCT 372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1590387628756032