Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2805 102 8e-17 seq48430 100 3e-16 seq56145 98.7 1e-15 seq56144 98.7 1e-15 seq48696 96.9 3e-15 seq2804 96.9 3e-15 seq56143 95.1 1e-14 >seq2805 Length=580 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | |||||| |||||||| || ||||||||| ||| || || |||||||| Sbjct 460 ATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGCCATCTTCGAGCTG 401 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||||| || | ||||||| ||| || ||||| ||||| ||||||||||| ||||| Sbjct 400 TTTGCCAGCAAAGATGAGCCTCTGTTGATCGGGCGGGATCCCTTCCTTGTCTTGAATCTT 341 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | || || | ||| || |||| |||| ||| ||||| || Sbjct 340 GGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTGCCAGT 281 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||||||| ||||| Sbjct 280 GAGGGTCTTAACGAAAATTTGCAT 257 >seq48430 Length=787 Score = 100 bits (110), Expect = 3e-16 Identities = 127/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| |||||||||||| ||| ||| | | | || || |||||||| || Sbjct 171 GTAGATTCCTTCTGGATATTGTAATCGGCCAAGGTGCGTCCA-TCTTCAAGCTGCTTACC 113 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | |||||||| || |||||||| ||||| ||||| ||||| ||| Sbjct 112 GGCGAAAATCAAACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGAATCTTGGTCTT 53 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || | || | |||||| || ||| || |||| ||||| |||||| ||| Sbjct 52 GACATTGTCGATGGTGTCGCTGCTCTCGACCTCGAGGGTGATGGTTTTCCCG 1 >seq56145 Length=1576 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || ||||||||||| ||||| ||||| | | || | |||||| || Sbjct 773 AAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTCCAGT 832 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| ||||| | || | ||||| || || ||||| || ||||| ||||| |||| Sbjct 833 TGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTGGATC 892 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | ||||| | || || || || | |||| |||||| ||| Sbjct 893 TTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTTTCCG 952 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || ||||| ||||| || |||||| Sbjct 953 GTTAGGGTTTTCACGAAGATTTGCATG 979 >seq56144 Length=1637 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || ||||||||||| ||||| ||||| | | || | |||||| || Sbjct 773 AAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTCCAGT 832 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| ||||| | || | ||||| || || ||||| || ||||| ||||| |||| Sbjct 833 TGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTGGATC 892 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | ||||| | || || || || | |||| |||||| ||| Sbjct 893 TTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTTTCCG 952 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || ||||| ||||| || |||||| Sbjct 953 GTTAGGGTTTTCACGAAGATTTGCATG 979 >seq48696 Length=1151 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | ||| || || ||||| || ||||| || | | || |||| |||||| ||| Sbjct 280 ATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCAGCAAGAGT--ACGACCGTCCTCAAGC 223 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || || ||| | || || || |||||||| || || || ||||||||||| |||| Sbjct 222 TGTTTTCCGGCGAAGATCAGACGTTGCTGGTCAGGGGGAATTCCTTCCTTGTCCTGGATC 163 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | ||||| | ||| || |||| |||| ||| || ||| Sbjct 162 TTAGCCTTGACGTTGTCGATGGTGTCAGAACTCTCGACCTCGAGAGTGATGGTCTTTCCG 103 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| ||||| || ||||| Sbjct 102 GTGAGGGTTTTAACGAATATTTGCAT 77 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| ||||||||||| | | || ||| || |||||||| || Sbjct 502 GGTCGACTCCTTCTGGATATTGTAATCAGCAAGAGTCCTTCCGTCTTCCAGCTGCTTACC 443 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || |||||| || |||||||| |||||||| || |||||| ||| Sbjct 442 CGCAAAGATCAACCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTGGATCTTAGCCTT 383 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || || | ||| || |||| ||||| |||||| ||||| || || Sbjct 382 CACGTTGTCGATGGTATCAGAACTCTCAACCTCGAGGGTGATGGTTTTCCCGGTGAGCGT 323 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 322 CTTAACAAAGATCTGCAT 305 >seq2804 Length=712 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || || || |||||||| |||||||| | | || | | | ||||| || Sbjct 462 AAATGGAGTGTAGATTCCTTCTGTATGTTGTAATCAGCAAGGGTACGGCCA-TCCTCTAG 404 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || ||||| || ||||||| ||||||||||| || ||||| ||||||||||| || Sbjct 403 TTGTTTGCCGGCAAAAATGAGACGCTGCTGGTCAGGTGGGATCCCTTCCTTGTCTTGAAT 344 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | || || | ||| || |||| |||| ||| ||||| Sbjct 343 CTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTGCC 284 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || |||||||| ||||| Sbjct 283 AGTGAGGGTCTTAACGAAAATTTGCAT 257 >seq56143 Length=1408 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || ||||||||||| ||||| ||||| | | || | |||||| || Sbjct 773 AAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTCCAGT 832 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| ||||| | || | ||||| || || ||||| || ||||| ||||| |||| Sbjct 833 TGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTGGATC 892 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | ||||| | || || || || | |||| |||||| || Sbjct 893 TTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTTTCCA 952 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || ||||| ||||| || |||||| Sbjct 953 GTTAGCGTTTTGACGAAGATTTGCATG 979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482969653581160