Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq56144 123 2e-23 seq56143 105 4e-18 seq53415 104 2e-17 seq56145 102 5e-17 seq2801 102 5e-17 seq48430 89.7 3e-13 seq60038 87.8 1e-12 seq33732 84.2 1e-11 >seq56144 Length=1637 Score = 123 bits (136), Expect = 2e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || ||||||||||| |||| || || || |||| ||||| |||||||||||||| Sbjct 1016 TCCTTCTGTATGTTGTAGTCGGCTAGGGTTCGGCCGTCTTCCAACTGTTTTCCGGCAAAG 1075 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 ||||| ||||||||||| | || | || || ||||| ||| || |||| || | Sbjct 1076 ATCAACCGCTGCTGATCGGGAGGAATTCCCTCCTTGTCTTGAATCTTAGCTTTC-ACGTT 1134 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | ||||||| ||||| || || | || || |||||||| |||| ||||| || Sbjct 1135 GTCGATGGTGTCGGAGGATTCAACCTCTAGGGTTATGGTTTTACCGGTTAGGGTTTTCAC 1194 Query 33738 AAAGATCTGCAT 33749 |||||| ||||| Sbjct 1195 AAAGATTTGCAT 1206 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| ||||| |||||| || || || ||||| | || || | |||| ||| Sbjct 770 ACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTCC 829 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| ||||| ||||| ||||| ||||| ||||| | || | ||||||||||| Sbjct 830 AGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTGG 889 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || ||| ||| || | ||| | ||||| ||||| || || | ||||| ||||| Sbjct 890 ATCTTCGCCTTC-ACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| || ||||| ||||| Sbjct 949 TCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 >seq56143 Length=1408 Score = 105 bits (116), Expect = 4e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| ||||| |||||| || || || ||||| | || || | |||| ||| Sbjct 770 ACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTCC 829 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| ||||| ||||| ||||| ||||| ||||| | || | ||||||||||| Sbjct 830 AGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTGG 889 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || ||| ||| || | ||| | ||||| ||||| || || | ||||| ||||| Sbjct 890 ATCTTCGCCTTC-ACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| |||||| || ||||| ||||| Sbjct 949 TCCAGTTAGCGTTTTGACGAAGATTTGCAT 978 >seq53415 Length=940 Score = 104 bits (114), Expect = 2e-17 Identities = 167/236 (71%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | || | ||| ||||| ||| || || |||||||| |||| | Sbjct 381 CCACCGCGGAGACGGAGGACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCG 322 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| ||||| || || ||||| || || | ||||||||||||| | || Sbjct 321 AGAGTGCGGCCGTCTTCCAACTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGGAGGA 262 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || || || | || | ||| | ||||||| || || || Sbjct 261 ATCCCCTCCTTGTCTTGGATCTT-GGTCTTGACGTTGTCGATGGTGTCGGAAGACTCAAC 203 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTG 33757 || | || ||||| || || |||| ||||| || ||||||||||| |||||| Sbjct 202 CTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT-CTTGGTG 148 >seq56145 Length=1576 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| ||||| |||||| || || || ||||| | || || | |||| ||| Sbjct 770 ACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTCC 829 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| ||||| ||||| ||||| ||||| ||||| | || | ||||||||||| Sbjct 830 AGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTGG 889 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || ||| ||| || | ||| | ||||| ||||| || || | ||||| ||||| Sbjct 890 ATCTTCGCCTTC-ACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| || ||||| ||||| Sbjct 949 TCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 >seq2801 Length=469 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||||||| || | || | || |||||| || || || ||||||||||| | Sbjct 299 CCACCTCTCAATCGGAGTACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCA 240 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || ||||||||||| || ||||| || | | |||||||| | || Sbjct 239 AGGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAGATAAGCCTTTGCTGATCAGGAGGA 180 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| || || ||||| |||| || | ||| | ||| || ||||| Sbjct 179 ATACCTTCCTTATCTTGGATTTTAGATTTC-ACGTTGTCTATGGTATCAGAACTCTCCAC 121 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| ||||| || || || ||||| |||||||| ||||| Sbjct 120 CTCAAGAGTGATAGTTTTGCCGGTCAATGTTTTCACAAAGATTTGCAT 73 >seq48430 Length=787 Score = 89.7 bits (98), Expect = 3e-13 Identities = 128/178 (72%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| ||||| || || || || |||||||||| | |||||| | || || | || Sbjct 178 ATGAAGAGTAGATTCCTTCTGGATATTGTAATCGGCCAAGGTGCGTCCATCTTCAAGCTG 119 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 || ||||| |||||||||||||||||||| | || | |||||||||||| ||| || Sbjct 118 CTTACCGGCGAAAATCAAACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGAATCTT 59 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACC 33722 || | |||| ||| | ||||||||| || || || | ||||| ||||| || Sbjct 58 -GGTCTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCGAGGGTGATGGTTTTCCC 2 >seq60038 Length=254 Score = 87.8 bits (96), Expect = 1e-12 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 33621 CAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGT 33680 ||| | ||||||||| | || | ||||||||||| ||| || || || |||| || Sbjct 254 CAACCTCTGCTGATCCGGAGGAATCCCTTCTTTGTCCTGAATCTT-TGCTTTGACATTGT 196 Query 33681 C-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAA 33739 | | |||||||||||| ||||| |||| ||||| || || || || | ||||| |||| Sbjct 195 CGATGGTGTCGCTTGACTCCACCTCAAGGGTGATAGTCTTGCCGGTAAGGGTTTTCACAA 136 Query 33740 AGATCTGCAT 33749 |||||||||| Sbjct 135 AGATCTGCAT 126 >seq33732 Length=802 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||| ||||| || ||| || || || ||||||||||| | Sbjct 478 ACCACCACGGAGACGGAGCACTAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGC 419 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | ||| || || |||||||| | ||||||||||||| | || Sbjct 418 AAGGGTACGCCCATCCTCTAGTTGCTTACCAGCAAAAATGAGACGCTGCTGATCTGGAGG 359 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TT 33697 | || || ||||| ||| || | | ||||| ||| | ||| || ||| | Sbjct 358 GATCCCCTCCTTGTCTTGAATCTT-GGACTTAACATTGTCTATGGTATC---TGAACTCT 303 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || |||| ||||| || || || || | || || |||||||| ||||| Sbjct 302 CAACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATTTGCAT 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328404910073280