Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq63568 580 3e-161 >seq63568 Length=1222 Score = 580 bits (642), Expect = 3e-161 Identities = 711/961 (74%), Gaps = 10/961 (1%) Strand=Plus/Minus Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591 ||||||||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 1056 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 998 Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650 |||| || ||||| || |||||||| || || ||||| || |||||||| || || || Sbjct 997 TTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 938 Query 19651 ACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG 19710 || || || || || ||||| |||||||| || || || || ||| | |||| | Sbjct 937 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 878 Query 19711 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAA 19768 | || || ||||| | ||||| ||||| || ||||||||| || |||||||| Sbjct 877 TTCTGCG--GCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAA 820 Query 19769 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTAT 19828 ||| | ||||| || || || | |||| | || | |||||| | |||| | | Sbjct 819 TGGTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 760 Query 19829 GCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGT 19888 ||||||||| || |||||||||||||| | ||| || || ||| | ||||||||| | Sbjct 759 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCT 700 Query 19889 GTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGG 19947 ||||| || || ||||| || ||||| || |||| || ||||| | ||||||| |||| Sbjct 699 GTTGCATATTCAGCTCCCGTCGCAGCTGCTACTGCAGT-TTTCTTGATCTACCCAATTGG 641 Query 19948 TCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTT 20007 ||| || ||||| || |||| ||||||| | || ||||| ||||| ||||||| ||| | Sbjct 640 TCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGAT 581 Query 20008 GGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGG 20067 ||||| || || || ||||| ||||| |||||||| || |||||| | ||||| ||||| Sbjct 580 TGTATTTCAGGCTGAGCATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGG 521 Query 20068 TGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG- 20126 ||||||||| || || ||||||||||| ||||||||||| |||| || | || | ||| Sbjct 520 TGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTC-CTTGGTAACTTCTAGTTTGA 462 Query 20127 TGCGTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAG 20186 | | || || || ||| | ||| | || | ||||||| || || ||||| |||| Sbjct 461 TCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAG 402 Query 20187 AGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTT 20246 | |||||||| || ||||| ||||| ||||| ||||| || |||||||||||||| ||| Sbjct 401 AAACCTATAATATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTA 342 Query 20247 CTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTT 20306 |||||||||| || ||| |||| |||||||| ||||| ||||| || ||||| || | Sbjct 341 GTTTCAACAATTCTCGCTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCT 282 Query 20307 GGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACC 20366 |||| | || || || | || ||||| || ||| | || |||||||| ||||||| Sbjct 281 GGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAACC 222 Query 20367 AGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTG 20426 | || | | || | | |||||||| ||| |||| |||||||| ||| | || |||| Sbjct 221 AATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTG 162 Query 20427 CTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTTG 20486 |||| || || | || || ||||||||||| ||||||||||| ||||| || ||||| | Sbjct 161 CTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAG 102 Query 20487 C 20487 | Sbjct 101 C 101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148696852013622