Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq63568 547 2e-151 >seq63568 Length=1222 Score = 547 bits (606), Expect = 2e-151 Identities = 704/964 (73%), Gaps = 8/964 (1%) Strand=Plus/Minus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 1056 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 998 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| || |||||||| || || ||||| || |||||||| || || || Sbjct 997 TTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 938 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 ||||| ||||| ||| || || |||||||| || || || || ||| | | || | Sbjct 937 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 878 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | || || ||||| | ||||| ||||| || ||||||||| || |||||||| Sbjct 877 TTCTGCG--GCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAA 820 Query 28897 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTAT 28956 ||| | ||||| || || || | |||| | || | |||||| | |||| || | Sbjct 819 TGGTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 760 Query 28957 GCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGT 29016 ||||||||| || |||||||||||||| | ||| || || ||| | || |||||| | Sbjct 759 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCT 700 Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || ||||| ||||||||||||||||| || |||| |||||| | |||||||| | ||| Sbjct 699 GTTGCATATTCAGCTCCCGTCGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGT 640 Query 29077 CAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTG 29136 ||||| ||| || | |||||| | || || || || || ||||||| ||| | Sbjct 639 CAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATT 580 Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || || || || || ||||| ||||| |||||||| || |||||| | || || ||||| Sbjct 579 GTATTTCAGGCTGAGCATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGT 520 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTG-T 29255 || ||||| ||||| ||||| ||||| ||||||||||| |||| | | || | ||| | Sbjct 519 GTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTC-CTTGGTAACTTCTAGTTTGAT 461 Query 29256 GCGTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 29315 | || || || ||| | ||| || | ||||||| || || ||||| ||||| Sbjct 460 CAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGA 401 Query 29316 GACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTC 29375 || ||||| || ||||| ||||||||||| ||||| || |||||||||||||||||| Sbjct 400 AACCTATAATATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 341 Query 29376 TTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 29435 |||||| ||| || ||| |||| |||||||| ||||| ||||| || ||||| || || Sbjct 340 TTTCAACAATTCTCGCTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTG 281 Query 29436 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA 29495 ||| | || || || | || ||||| || ||| | || ||||| || |||||||| Sbjct 280 GTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAACCA 221 Query 29496 GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGC 29555 || | | || | | |||||||| |||||||| ||||||||| || | || || || Sbjct 220 ATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGC 161 Query 29556 TAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 |||||| || | ||||| |||||||| |||||||||||||| ||||| || || || || Sbjct 160 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGC 101 Query 29616 TACA 29619 | || Sbjct 100 TGCA 97 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146535569854014