Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq63568 621 1e-173 >seq63568 Length=1222 Score = 621 bits (688), Expect = 1e-173 Identities = 733/982 (75%), Gaps = 10/982 (1%) Strand=Plus/Minus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || ||| ||||| ||||||| || || ||||||||||| || || |||||||| || Sbjct 1083 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1024 Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841 ||||| || | || ||| | || ||| | ||| || ||||| || ||||||||||| | Sbjct 1023 ATGATCCC-TACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 966 Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901 |||| ||||| |||||||| || || ||||||||| | || ||| ||||| ||||||| Sbjct 965 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACA 906 Query 18902 ACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCC 18959 | || || || || ||| | |||| | | || || ||||| | ||||| ||||| Sbjct 905 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCG--GCTATCGGTTTGCACTTTTACCC 848 Query 18960 AATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGT 19019 || ||||||||| || ||||||||||| | ||||| || || || | |||| | Sbjct 847 GATATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAAT 788 Query 19020 GGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTA 19079 || | |||||| | |||| || | ||||||||| || |||||||||||||| | Sbjct 787 TGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTT 728 Query 19080 TCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTC 19139 ||| || || ||||||||||||||| |||||| || |||||||| || || || || | Sbjct 727 TCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCCGTCGCAGCTGCTAC 668 Query 19140 TGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGG 19199 ||| || ||| | |||| ||| |||||||||| |||| || | ||||||| | || Sbjct 667 TGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGG 608 Query 19200 TATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCA 19259 || |||||| ||||||| ||| ||||||| |||||||| ||||| || || ||||| Sbjct 607 AATCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 548 Query 19260 CCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCA 19319 ||| || |||||| | ||||| |||||||| |||||||| || ||||| ||||| ||||| Sbjct 547 CCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 488 Query 19320 CGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACT 19378 |||||| |||| || | || | ||| | | ||||| || ||| | | |||| || Sbjct 487 CGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATG 429 Query 19379 ATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATT 19438 | || |||| || || ||||| ||||| || ||||| ||||| |||||||| || |||| Sbjct 428 AAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCACGGTTATT 369 Query 19439 TTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTT 19498 |||| || | || ||||| || || ||||||||| || ||| |||||||||| Sbjct 368 TTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGCTCTTTACATTTCTTCC 309 Query 19499 TGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCAT 19558 | |||||||||||||| || || || |||||| |||| | || | ||||| ||||| | Sbjct 308 TAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTT 249 Query 19559 TCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTG 19618 |||| || ||||| || || |||||||| || | |||| | | |||||||| ||| Sbjct 248 TCAATTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA 189 Query 19619 ATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTA 19678 |||| |||||||| ||| | || ||||||||||| || | || || ||||| ||||||| Sbjct 188 ATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTA 129 Query 19679 ATGCTCATAACTTCCCACTTGA 19700 |||||||||| ||||| || || Sbjct 128 ATGCTCATAATTTCCCTCTAGA 107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141023660914422