Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq2805 95.1 1e-14 seq34025 82.4 6e-11 seq33732 82.4 6e-11 seq2804 82.4 6e-11 >seq2805 Length=580 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 106251 AGTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACA 106310 || || || ||||||||||| ||||| || | |||||||||||||| || | ||| Sbjct 248 AGATTCAAGATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTT 307 Query 106311 GAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCC 106370 || ||| | | | | | || || || ||| ||||| ||||| | || Sbjct 308 GAGAGTTCAGATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCG 367 Query 106371 GTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGC 106430 |||||||| ||||| || | ||| |||||||| | |||||| | |||| ||| | Sbjct 368 CCCGATCAACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCC 427 Query 106431 GATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||||||||||| || |||||||| || || ||| | || ||| Sbjct 428 GATTACAACATCCAGAAAGAATCCACCCTCCATCTTGTGTTG 469 >seq34025 Length=456 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || || || ||||| || |||||||||||| | || |||| Sbjct 133 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATTACCTTAGAGGTAGAAAGTTCA 192 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | ||||| |||||| ||||| || || | || ||||| Sbjct 193 GACACCATTGATAACGTGAAGGCAAAAATACAAGACAAGGAGGGAATCCCACCAGATCAG 252 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||| | || | ||| |||||||| | |||||| | |||| ||| |||||||||| Sbjct 253 CAGAGGTTGATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACAAC 312 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || || |||||||| || || ||| | || ||| Sbjct 313 ATCCAGAAAGAATCCACCCTCCATCTTGTGTTG 345 >seq33732 Length=802 Score = 82.4 bits (90), Expect = 6e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 |||||||| ||| | || || ||||| ||||| || | ||| |||||||| | ||| Sbjct 572 GACAAAGAGGGCATTCCACCGGACCAACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAA 631 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| | |||| ||| |||||||||||| || |||||||| || || ||| | || ||| Sbjct 632 GATGGCAGAACTTTGGCCGATTACAACATCCAGAAAGAATCCACCCTCCATCTTGTGTTG 691 >seq2804 Length=712 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||| | ||||| |||||||| ||| | || || | Sbjct 485 ATGCAAATCTTTGTGAAAACTCTCACTGGAAAGACCATCACCCTTGAGGTCGAGAGCTCT 544 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | | || ||| || ||| || ||||| ||| | || || ||| Sbjct 545 GATACCATTGACAATGTCAAAGCCAAGATTCAGGATAAAGAGGGCATTCCACCCGACCAA 604 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || |||||||| | ||| |||||||| | || ||| | |||| | | ||||||||| Sbjct 605 CAGAGGCTTATCTTTGCTGGCAAACAGCTTGAGGATGGCAGAACTTTAGCAGATTACAAC 664 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || || ||||| || || || ||| | || ||| Sbjct 665 ATTCAGAAAGAGTCAACTCTCCATCTTGTGTTG 697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401963517656672