Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq25475 221 2e-51 >seq25475 Length=2349 Score = 221 bits (244), Expect = 2e-51 Identities = 378/542 (70%), Gaps = 10/542 (2%) Strand=Plus/Minus Query 1455733 TAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCA 1455792 |||||| |||| || | ||||||| |||| |||| || |||||||||||| | Sbjct 2126 TAACCCAGACCGTTTCTGCATGTTCCCAATCCAATACCCTAAAATCTGGGAAATGTACAA 2067 Query 1455793 AAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCC 1455852 |||| |||| ||||| || ||||||||||| || ||||| ||| | || | | Sbjct 2066 GAAAG-CCGAAGCCTCTTTCTGGACCGCCGAAGAAGTCGATCTCTCCCAAGATAACCAGC 2008 Query 1455853 ACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTC 1455912 ||||| | || || | ||||| |||||||| || | ||| ||||| ||||| ||| Sbjct 2007 ACTGGATCTCCCTCACCGACGGTGAGCGCCACTTTGTTTCGCATGTCCTTGCCTTCTTT- 1949 Query 1455913 GCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAA 1455972 |||||| ||| || ||||| ||||| || ||||| | || |||||||| ||||| Sbjct 1948 GCCGCCTCCGACGGAATCGTCTTGGAGAATCTCGCCGGAAGATTCATGAAAGAAATCCAA 1889 Query 1455973 TTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAA 1456032 | ||||||| ||| || ||||| ||||||||||| ||||| || ||||| || || Sbjct 1888 ATCTCAGAGGCGCGTGCCTTCTACGGATTCCAGATCGCAATCGAGAATATCCATTCAGAG 1829 Query 1456033 ACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTT 1456092 | || || || || |||| | || |||| || | | |||||| | | | ||| Sbjct 1828 ATGTATTCTCTTCTCCTCGAGGCGTATATCAAAGATTCAGCAGAGAAGAATCGTTTGTTT 1769 Query 1456093 CGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATC 1456152 | ||| || || ||| | || | | ||||||||| || ||||||||||| |||||| Sbjct 1768 CACGCGATTGAGACGATTCCATGTATTGCGAAAAAGGCGGAATGGGCGATGAAATGGATC 1709 Query 1456153 AACAAGGAGGGCCTCGACAC-TTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGGGC 1456210 | | || || || || || ||| || | || | ||||| |||| || || Sbjct 1708 -----GATTCGTCT-GATACATTCGCTGAGAGGATTGTAGCATTTGCTTGCGTTGAAGGT 1655 Query 1456211 ATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCC 1456270 || ||||| || || |||||||| || || || |||||||| || ||||| | ||||| Sbjct 1654 ATATTTTTTTCAGGTAGTTTCTGTGCGATTTTCTGGCTCAAAAAACGCGGTTTAATGCCA 1595 Query 1456271 GG 1456272 || Sbjct 1594 GG 1593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7170610202226758