Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq56144 123 2e-23 seq48696 100 3e-16 seq48430 98.7 9e-16 seq34025 98.7 9e-16 seq33732 96.9 3e-15 seq2799 95.1 1e-14 seq62831 89.7 5e-13 seq56145 87.8 2e-12 seq2804 87.8 2e-12 >seq56144 Length=1637 Score = 123 bits (136), Expect = 2e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| ||||| | |||||| |||| |||| ||| || || ||||| Sbjct 1016 TCCTTCTGTATGTTGTAGTCGGCTAGGGTTCGGCCGTCTTCCAACTGTTTTCCGGCAAAG 1075 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||||||||||||| || | ||||| | |||||||| | ||| || |||| ||| Sbjct 1076 ATCAACCGCTGCTGATCGGGAGGAATTCCCTCCTTGT-CTTGAATCTTAGCTTTCACGTT 1134 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||||| ||||| ||||| | || || |||||||| || | |||||||| Sbjct 1135 GTCGATGGTGTCGGAGGATTCAACCTCTAGGGTTATGGTTTTACCGGTTAGGGTTTTCAC 1194 Query 35725 AAATATCTGCAT 35736 ||| || ||||| Sbjct 1195 AAAGATTTGCAT 1206 >seq48696 Length=1151 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || |||||||| || | || | |||| |||||||||||||||||||| Sbjct 496 CTCCTTCTGGATATTGTAATCAGCAAGAGTCCTTCCGTCTTCCAGCTGCTTACCCGCAAA 437 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| |||||| |||| ||| | | ||||| ||| |||||| ||||| || Sbjct 436 GATCAACCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTGGATCTTAGCCTTCA-CGT 378 Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | || || ||| || ||||| | ||||| ||||| || || | || | Sbjct 377 TGTCGATGGTATCAGAACTC---TCAACCTCGAGGGTGATGGTTTTCCCGGTGAGCGTCT 321 Query 35721 TCACAAATATCTGCAT 35736 | ||||| |||||||| Sbjct 320 TAACAAAGATCTGCAT 305 >seq48430 Length=787 Score = 98.7 bits (108), Expect = 9e-16 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | ||| | || | ||| | ||| ||||| || || |||||||||| Sbjct 203 TTCCACCACGAAGCCTGAGAACAAGATGAAGAGTAGATTCCTTCTGGATATTGTAATCGG 144 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 ||||||| || | || || ||||||||||| || || ||||| |||||||| |||| || Sbjct 143 CCAAGGTGCGTCCATCTTCAAGCTGCTTACCGGCGAAAATCAAACGCTGCTGATCCGGAG 84 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | | | || ||||| ||||| ||| | | | | | |||||||| || | Sbjct 83 GGATACCTTCTTTGTCTTGAATCTTGGTCTTGACATTGTCGATGGTGTCGCTGCTCTCGA 24 Query 35688 CCTCCACCGTGATCGTTTTACC 35709 |||| | ||||| ||||| || Sbjct 23 CCTCGAGGGTGATGGTTTTCCC 2 >seq34025 Length=456 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | |||||| | ||| | || || || || ||||||||||||||| Sbjct 359 CCACCACGAAGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCC 300 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| | || || ||||| || || ||||| ||||||| |||||| || | || Sbjct 299 AAAGTTCTGCCATCTTCGAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 240 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| || ||| ||||| | | | ||||| ||| ||| Sbjct 239 ATTCCCTCCTTGTCTTGTATTTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCTACC 180 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || || || |||||||| ||||| || |||||||| Sbjct 179 TCTAAGGTAATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 133 Score = 93.3 bits (102), Expect = 4e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||| ||||||||||| ||||| | || || |||||||| |||||||| Sbjct 96 CTCCTTCTGAATGTTATAATCGGCCAAAGTTCGGCCATCTTCAAGCTGCTTTCCCGCAAA 37 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTT 35640 ||||| | ||||||||| | |||| | |||||| Sbjct 36 AATCAATCTCTGCTGGTCTGGGGGAATACCCTCCTT 1 >seq33732 Length=802 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | |||||| | ||| | || || || || ||||||||||||||| Sbjct 705 CCACCACGAAGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCC 646 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| | || || ||||| || || ||||| || | || ||| ||||||| ||| Sbjct 645 AAAGTTCTGCCATCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCCGGTGGA 586 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | || ||| |||||| |||||| ||| | | | | | ||||| ||| ||| Sbjct 585 ATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCTGAACTC---TCC 529 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | || || || || || || | ||||| ||||| || ||||| Sbjct 528 ACCTCTAGTGTAATGGTCTTTCCTGTAAGGGTTTTGACAAAGATTTGCAT 479 >seq2799 Length=391 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||| || |||||||||| ||||| | || || ||||| || || ||||| Sbjct 258 TCCTTCTGAATATTATAATCGGCCAGAGTTCGGCCATCTTCGAGCTGTTTTCCAGCAAAG 199 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || |||||| |||| || | | ||| ||||| ||||| ||||| | | Sbjct 198 ATAAGCCTCTGCTGATCCGGTGGGATACCCTCTTTGTCTTGTATCTTGGCCTTCACATTG 139 Query 35666 GCCACCGTGTCG---CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTC 35722 | | ||||| ||| || ||||| | ||||| || || || |||| ||| ||| Sbjct 138 TCAATTGTGTCAGAACTC---TCAACCTCAAGGGTGATGGTCTTTCCTGTCAGAGTCTTC 82 Query 35723 ACAAATATCTGCAT 35736 |||||||||||||| Sbjct 81 ACAAATATCTGCAT 68 >seq62831 Length=874 Score = 89.7 bits (98), Expect = 5e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| || | | ||||| ||||| || | ||| || ||||||||||| ||||| | Sbjct 137 TTCCTCCTCTGAGCCTCAGGACCAAGTGAAGCGTTGATTCTTTTTGAATGTTATAATCAG 78 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | || || | || |||||||||||||| ||||| ||||||| ||||||||| | || Sbjct 77 CAAGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAAATCAACCTCTGCTGGTCAGGAG 18 Query 35628 GAACGCTCTCCTTGTCC 35644 | | | ||||||||| Sbjct 17 GGATACCTTCCTTGTCC 1 >seq56145 Length=1576 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| ||||| | |||||| |||| |||| ||| || || ||||| Sbjct 1016 TCCTTCTGTATGTTGTAGTCGGCTAGGGTTCGGCCGTCTTCCAACTGTTTTCCGGCAAAG 1075 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 |||||||||||||| || | ||||| | ||||||| Sbjct 1076 ATCAACCGCTGCTGATCGGGAGGAATTCCCTCCTTG 1111 >seq2804 Length=712 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | |||||| | ||| | || ||| || |||||||||||||| || Sbjct 711 CCACCACGAAGACGCAACACAAGATGGAGAGTTGACTCTTTCTGAATGTTGTAATCTGCT 652 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| | || || ||||| || || ||||| || | || ||| ||||| | ||| Sbjct 651 AAAGTTCTGCCATCCTCAAGCTGTTTGCCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGA 592 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | || ||| || ||| ||||| || | | | | | || || |||| || Sbjct 591 ATGCCCTCTTTATCCTGAATCTTGGCTTTGACATTGTCAATGGTATCAGAGCTC---TCG 535 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||| || || || || | |||||||||||| || ||||| Sbjct 534 ACCTCAAGGGTGATGGTCTTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450372902507720