Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq56144 163 3e-35 seq2805 143 3e-29 seq34025 140 3e-28 seq48696 129 6e-25 seq2801 127 2e-24 seq33732 122 9e-23 seq2804 120 3e-22 seq53415 114 1e-20 seq48430 105 7e-18 seq62831 96.9 3e-15 seq56145 93.3 4e-14 seq2799 89.7 5e-13 >seq56144 Length=1637 Score = 163 bits (180), Expect = 3e-35 Identities = 180/240 (75%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| ||||| |||||||| || |||||||||||| | Sbjct 980 CCGCCGCGGAGACGGAGTACCAGGTGGAGCGTTGATTCCTTCTGTATGTTGTAGTCGGCT 1039 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || | |||||| || ||||| ||||| |||||||||||||| || Sbjct 1040 AGGGTTCGGCCGTCTTCCAACTGTTTTCCGGCAAAGATCAACCGCTGCTGATCGGGAGGA 1099 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || |||||||| || ||| || ||| | |||||||| ||||| || Sbjct 1100 ATTCCCTCCTTGTCTTGAATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGGATTCAACC 1159 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTTC 134726 || || || |||||||||||||||| ||||| || || |||||||| || |||| || Sbjct 1160 TCTAGGGTTATGGTTTTACCGGTTAGGGTTTTCACAAAGATTTGCATGATGAATTTGATC 1219 >seq2805 Length=580 Score = 143 bits (158), Expect = 3e-29 Identities = 167/223 (75%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG-CCAACGGTGTG 134554 ||||||||||| || || || |||||||| || || |||||||| ||| |||| | | || Sbjct 474 AGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTG 415 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || |||||||||||||| ||||| || | | ||| ||||||||||| || ||||| Sbjct 414 CCA-TCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGATCGGGCGGGATCCCTTC 356 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || |||||||| || || || ||| | || || || || || |||||||| Sbjct 355 CTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGT 296 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || | || ||||||||||||||||| ||| Sbjct 295 GATGGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCATCTTG 253 >seq34025 Length=456 Score = 140 bits (154), Expect = 3e-28 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG-CCAACGGTGTG 134554 ||||||||||| || || || |||||||| || || |||||||| ||| |||| | | || Sbjct 350 AGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTG 291 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || |||||||||||||| ||||| ||||| | ||||||||| || || || || || Sbjct 290 CCA-TCTTCGAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTC 232 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || ||||| |||||| || || || | ||||| || ||| || || | || Sbjct 231 CTTGTCTTGTATTTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCTACCTCTAAGGT 172 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||| || ||||| ||||| || ||||| || ||||| Sbjct 171 AATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 133 >seq48696 Length=1151 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | || || || || || |||||||| || ||||||||||| || Sbjct 303 CCTCCACGGAGACGGAGGACAAGATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCAGCA 244 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || ||| || |||||||| || || || |||| ||| ||||| || || || Sbjct 243 AGAGTACGACCGTCCTCAAGCTGTTTTCCGGCGAAGATCAGACGTTGCTGGTCAGGGGGA 184 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || ||||| ||| | ||||| || || || Sbjct 183 ATTCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAACTCTCGACC 124 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 |||||||| ||||| || ||||| | ||||||||||| |||||||| ||| Sbjct 123 TCGAGAGTGATGGTCTTTCCGGTGAGGGTTTTAACGAATATTTGCATCTTG 73 >seq2801 Length=469 Score = 127 bits (140), Expect = 2e-24 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| ||||| | ||| | || ||||| || ||||||||||| || |||||||| || Sbjct 301 TTCCACCTCTCAATCGGAGTACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAG 242 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| |||| || || || | ||||| || ||||| || | | |||||||| || | Sbjct 241 CAAGGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAGATAAGCCTTTGCTGATCAGGAG 182 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || ||||| ||||| ||| || ||| | || || || |||| Sbjct 181 GAATACCTTCCTTATCTTGGATTTTAGATTTCACGTTGTCTATGGTATCAGAACTCTCCA 122 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 | || ||||| || ||||| ||||| || ||||| || || |||||||| ||| Sbjct 121 CCTCAAGAGTGATAGTTTTGCCGGTCAATGTTTTCACAAAGATTTGCATCTTG 69 >seq33732 Length=802 Score = 122 bits (134), Expect = 9e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG-CCAACGGTGTG 134554 ||||||||||| || || || |||||||| || || |||||||| ||| |||| | | || Sbjct 696 AGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTG 637 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || |||||||||||||| ||||| || | | ||| || || || || ||||| || Sbjct 636 CCA-TCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCCGGTGGAATGCCCTC 578 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 ||| || || || || ||||| ||| | ||||| || ||||| || || || Sbjct 577 TTTGTCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCTGAACTCTCCACCTCTAGTGT 518 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||| || || || | ||||| || || |||||||| Sbjct 517 AATGGTCTTTCCTGTAAGGGTTTTGACAAAGATTTGCAT 479 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | || || ||||||||||| || |||||||| || || Sbjct 477 CCACCACGGAGACGGAGCACTAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCA 418 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || || || || || |||||||| | |||||||||||| || || Sbjct 417 AGGGTACGCCCATCCTCTAGTTGCTTACCAGCAAAAATGAGACGCTGCTGATCTGGAGGG 358 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || |||||||| || || || ||| | || || || || || Sbjct 357 ATCCCCTCCTTGTCTTGAATCTTGGACTTAACATTGTCTATGGTATCTGAACTCTCAACT 298 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || ||||| ||||| || || || | || || || || |||||||| ||| Sbjct 297 TCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATTTGCATCTTG 247 >seq2804 Length=712 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | || || || |||||||| || |||||||| || || Sbjct 483 CCACCACGGAGACGGAGCACCAAATGGAGTGTAGATTCCTTCTGTATGTTGTAATCAGCA 424 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || || |||||||| |||||||| | ||||||||| || || || Sbjct 423 AGGGTACGGCCATCCTCTAGTTGTTTGCCGGCAAAAATGAGACGCTGCTGGTCAGGTGGG 364 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || |||||||| || || || ||| | || || || || || Sbjct 363 ATCCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACT 304 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 |||||||| ||||| || || || | || ||||||||||||||||| ||| Sbjct 303 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCATCTTG 253 Score = 109 bits (120), Expect = 6e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 || |||||||| || || || || || || || ||||||||||| || || || | | || Sbjct 702 AGACGCAACACAAGATGGAGAGTTGACTCTTTCTGAATGTTGTAATCTGCTAAAGTTCTG 643 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || ||||||||||| ||||| || | | ||| || ||||| || ||||| || Sbjct 642 CCA-TCCTCAAGCTGTTTGCCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTC 584 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 ||| || ||||| || |||||| ||| | || || || || || || || || Sbjct 583 TTTATCCTGAATCTTGGCTTTGACATTGTCAATGGTATCAGAGCTCTCGACCTCAAGGGT 524 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | |||||| || || |||||||| Sbjct 523 GATGGTCTTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 485 >seq53415 Length=940 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || || || ||||| || |||||||||||| | Sbjct 381 CCACCGCGGAGACGGAGGACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCG 322 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || | ||| || || || || || | |||||||||||| || || Sbjct 321 AGAGTGCGGCCGTCTTCCAACTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGGAGGA 262 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| ||| | |||||||| || || || Sbjct 261 ATCCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACC 202 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || || || |||| ||||| ||||| || ||||| ||| Sbjct 201 TCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTG 151 >seq48430 Length=787 Score = 105 bits (116), Expect = 7e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || |||||||| || || ||||| ||| | | |||| | || || Sbjct 183 ACAAGATGAAGAGTAGATTCCTTCTGGATATTGTAATCGGCCAAGGTGCGTCCATCTTCA 124 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || |||||||||||||||||||| || || || |||||||| |||||| Sbjct 123 AGCTGCTTACCGGCGAAAATCAAACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGA 64 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||| || || ||||| || |||||||| Sbjct 63 ATCTTGGTCTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCGAGGGTGATGGTTTTC 4 Query 134685 CCG 134687 ||| Sbjct 3 CCG 1 >seq62831 Length=874 Score = 96.9 bits (106), Expect = 3e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||||||||| | || || | ||| ||||| ||||| ||||||||||| || || Sbjct 137 TTCCTCCTCTGAGCCTCAGGACCAAGTGAAGCGTTGATTCTTTTTGAATGTTATAATCAG 78 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| ||| || || || ||||| || || ||||||||||| | |||||| || || | Sbjct 77 CAAGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAAATCAACCTCTGCTGGTCAGGAG 18 Query 134605 GTATGCCTTCTTTTTC 134620 | || ||||| || || Sbjct 17 GGATACCTTCCTTGTC 2 >seq56145 Length=1576 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| ||||| |||||||| || |||||||||||| | Sbjct 980 CCGCCGCGGAGACGGAGTACCAGGTGGAGCGTTGATTCCTTCTGTATGTTGTAGTCGGCT 1039 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || | |||||| || ||||| ||||| |||||||||||||| || Sbjct 1040 AGGGTTCGGCCGTCTTCCAACTGTTTTCCGGCAAAGATCAACCGCTGCTGATCGGGAGGA 1099 Query 134607 ATGCCTTCTTT 134617 || || || || Sbjct 1100 ATTCCCTCCTT 1110 >seq2799 Length=391 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || | || | || || || || ||||||||||| ||||| || || ||| | Sbjct 294 CCTCCCCTCAAACGTAGGACAAGATGAAGGGTGGATTCCTTCTGAATATTATAATCGGCC 235 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || ||||||||||| || ||||| || | | ||||||||| || || Sbjct 234 AGAGTTCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGTGGG 175 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || ||||| ||||| || || || || ||| | |||||| || || || Sbjct 174 ATACCCTCTTTGTCTTGTATCTTGGCCTTCACATTGTCAATTGTGTCAGAACTCTCAACC 115 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | ||| || || || || ||||| Sbjct 114 TCAAGGGTGATGGTCTTTCCTGTCAGAGTCTTCACAAATATCTGCAT 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504926743260680