Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq63568 571 7e-158 seq67767 161 1e-34 seq65592 156 5e-33 seq47049 102 9e-17 seq70055 95.1 1e-14 >seq63568 Length=1222 Score = 571 bits (632), Expect = 7e-158 Identities = 737/1010 (73%), Gaps = 8/1010 (1%) Strand=Plus/Minus Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734 |||||| | ||| ||||| || | |||||| | || |||| ||||| ||||| | Sbjct 1084 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 1025 Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157793 |||||| ||||| || | | |||||| ||||| || || |||| ||| | ||||| | Sbjct 1024 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 966 Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853 | || || || ||||| || || || || || ||| |||| || || | || || |||| Sbjct 965 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACA 906 Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913 | || || |||||||| || |||||| ||| || |||||| | ||||| ||||| | Sbjct 905 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGA 846 Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAG 157973 | |||||||| ||||| |||| || ||| | || || |||||||||| |||| | | Sbjct 845 TATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTG 786 Query 157974 TATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACC 158033 | | |||||| | | || | | || ||||| |||||||||||||| || | Sbjct 785 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTC 726 Query 158034 GTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTG 158093 || | ||||||||||| ||||| ||| |||||||| ||||| ||||| || || | || Sbjct 725 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCCGTCGCAGCTGCTACTG 666 Query 158094 CAGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 158153 |||| ||| | |||| || | |||||||| || || |||| ||||||||| || | Sbjct 665 CAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAA 606 Query 158154 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACC 158213 ||||||||||||| |||| ||| ||||||| || || || || || || |||||||||| Sbjct 605 TCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCACC 546 Query 158214 CGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 158273 | || || ||| | ||||| ||||| |||||||| || || || ||| ||||||||| | Sbjct 545 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACG 486 Query 158274 GAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTAC 158332 | | || ||||| | | | || | ||||| || |||| || || || | Sbjct 485 GTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 427 Query 158333 GGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTC 158392 ||||| | ||||||||||| ||||| ||||| || || || || || || || || || Sbjct 426 GGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCACGGTTATTTT 367 Query 158393 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 158452 || || |||||||||||||| ||| |||||||| || || || || || |||||||| Sbjct 366 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGCTCTTTACATTTCTTCCTA 307 Query 158453 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCAT 158510 ||||| |||||||| || || |||||||| ||||| | || | ||| || ||||| | Sbjct 306 GCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGG--TATCAGCACTATGGCTT 249 Query 158511 TCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGA 158570 |||| | || |||||||| || ||||| || | ||||| |||| |||||||| | | Sbjct 248 TCAATTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA 189 Query 158571 ACACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTA 158630 | |||||||| ||| | | ||||| ||| ||||||||||||||||||||||| |||| Sbjct 188 ATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTA 129 Query 158631 ACGCACACAACTTCCCACTGGATCTTGCTGCTGCTGAGTCTACACCTGTA 158680 | || || || ||||| || || || ||||| | ||| || || || || Sbjct 128 ATGCTCATAATTTCCCTCTAGACCTAGCTGCAGTCGAGGCTCCATCTATA 79 >seq67767 Length=213 Score = 161 bits (178), Expect = 1e-34 Identities = 159/203 (78%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 159643 CGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTTGCTCTCCACGGTGCATTCGCTCTC 159702 || ||||| ||| | || || | ||| | ||||||||||| |||||||| |||| | Sbjct 12 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCTTTCGGATTA 71 Query 159703 ATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG-TCTAGTTGGTATCCGTCCTTACAA 159761 |||||||||||| |||| ||||||||| ||||||| ||| ||| | || ||||| || Sbjct 72 ATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCT-GTTCAATTGCGGCCTTATAA 130 Query 159762 TGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTATTCCTTATCTATCCACT 159821 ||| || || ||||| ||||| |||||||||||||| || ||||| || |||||||| Sbjct 131 TGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTGATTTATCCACT 190 Query 159822 GGGTCAGTCTTCATGGTTCTTTG 159844 ||| |||||| |||||||||| Sbjct 191 GGGCCAGTCTGGTTGGTTCTTTG 213 >seq65592 Length=292 Score = 156 bits (172), Expect = 5e-33 Identities = 151/194 (78%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 160198 GGTCTTGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAA 160257 ||||| || | ||||| ||||| || || || || ||| || || | ||||||||| Sbjct 18 GGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCAGAA 77 Query 160258 GATCCTGAATTTGAGACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCT 160317 ||||||||||||||||| ||||||||||| || || || || || ||||| ||||||| Sbjct 78 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 137 Query 160318 TGGATGGCACCTGCTGATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCT 160377 |||||||| || ||||| || ||||||||| |||| ||||||||||| || ||||| Sbjct 138 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 197 Query 160378 AGAGGTAACGCACT 160391 | || ||||| || Sbjct 198 CGTGGAAACGCTCT 211 >seq47049 Length=776 Score = 102 bits (112), Expect = 9e-17 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 158844 TACATTCTAGACGCTGCAGAAGAGGCAGGAGTTGATATTAACTATTCCTGTCGTGCTGGT 158903 |||||||| ||| ||| ||||| | ||| ||||| | || || || | |||||| Sbjct 467 TACATTCTTGACCATGCTGAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGT 408 Query 158904 GCCTGTTCTTCCTGTGCTGGTAAACTTGTCAGCGGAACTGTTGACCAAAGCGATCAGTCA 158963 | |||||||| |||||||||||| |||| | || ||||| ||| ||| || Sbjct 407 TCTTGTTCTTCATGTGCTGGTAAAGTTGTTGGTGGTGAAGTTGATCAATCTGATGGTTCT 348 Query 158964 TTCTTGGATGATGATCAGATTGCAGAAGGATTTATCCTTACGTGTGTATCTTATCCCACT 159023 ||| | |||||||| ||||||| || || ||| | ||||| ||||| ||||||| | Sbjct 347 TTCCTTGATGATGACCAGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCCTAAG 288 Query 159024 TCTGAT 159029 |||||| Sbjct 287 TCTGAT 282 >seq70055 Length=284 Score = 95.1 bits (104), Expect = 1e-14 Identities = 166/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438 |||||| | ||||||||||| | | || || ||||| |||||||||||||| || Sbjct 242 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTGGGTTGGTCCGGT 183 Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498 || | || |||| || ||| | ||| | || |||||| | || || || || ||| Sbjct 182 CTATTGCTCTTTCCTTGCGCCTATTTTGCCGTGGGGGGTTGGTTCACAGGTACCACCTTT 123 Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCTAATTTTCTC 159558 | || ||||| || || || | || |||||||| | |||||| ||| || | Sbjct 122 GTAACTTCATGGTATACTCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 63 Query 159559 ACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 159618 || ||||| ||||| || |||||| || | | | || ||| | | |||| |||||| Sbjct 62 ACTGCAGCAGTCTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGT 3 Query 159619 CC 159620 || Sbjct 2 CC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572489232514800