Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq63568 547 7e-151 seq65592 129 7e-25 seq67767 116 4e-21 seq47049 91.5 2e-13 >seq63568 Length=1222 Score = 547 bits (606), Expect = 7e-151 Identities = 701/961 (73%), Gaps = 4/961 (0%) Strand=Plus/Minus Query 159987 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 160046 ||||| || || | || ||||| || || ||||||| || || | ||| | ||||| Sbjct 1056 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 997 Query 160047 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 160105 ||||| || || |||| ||| | ||||| || || || || || || || || ||||| Sbjct 996 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 938 Query 160106 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATC 160165 || || |||| || || | || || ||||| || || |||||||| || |||| | Sbjct 937 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 878 Query 160166 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 160225 ||| || || ||| | ||||| || || || |||||||| ||||| ||||||| || Sbjct 877 TTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAATG 818 Query 160226 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTTATCGGCATCTATGC 160285 | | || || |||||||||| |||| | || | |||||| | | || | | Sbjct 817 GTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 758 Query 160286 ATATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGT 160345 || ||||| ||||||||||||||| | ||| | ||||||||||| ||||| ||| Sbjct 757 TTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCTGT 698 Query 160346 AGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCA 160405 |||||||| ||||| ||||| || || |||| || ||| | | || || | ||||| Sbjct 697 TGCATATTCAGCTCCCGTCGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGTCA 638 Query 160406 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 160465 ||| || || |||| ||||||||| || |||||||||||||| |||| ||| |||| Sbjct 637 AGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGT 578 Query 160466 ATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGT 160525 ||| || || || || ||||| |||||||| || || |||||| | || || ||||| || Sbjct 577 ATTTCAGGCTGAGCATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 518 Query 160526 ATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTC- 160584 |||||| || || | ||| |||||||||||| | || ||||| | | | || Sbjct 517 ATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTTC-TAGTTTGATCA 459 Query 160585 GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAGAGA 160644 | ||||| || |||| || || || | ||||| | ||||||||||||||||| | Sbjct 458 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAA 399 Query 160645 CCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCAT 160704 |||| || || || || || || ||||| || || || ||||||||||||||||| | Sbjct 398 CCTATAATATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 339 Query 160705 TCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCTGGT 160764 ||||||| || || || | || |||||||| || || ||||||||||| || ||||||| Sbjct 338 TCAACAATTCTCGCTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGT 279 Query 160765 TCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGT 160824 | || || | ||| | ||||| ||||| ||||| | || |||||||| || ||||| | Sbjct 278 TTACCGCGTTAGGTATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAACCAAT 219 Query 160825 CCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCGTGCTG 160884 | | | ||| |||||||||||||| | || |||||||| || | | || |||||| Sbjct 218 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTA 159 Query 160885 GTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTCGCTG 160944 ||||||||||||||||||||||| ||||| || || || ||||| || ||||| |||| Sbjct 158 ACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGCTG 99 Query 160945 C 160945 | Sbjct 98 C 98 >seq65592 Length=292 Score = 129 bits (142), Expect = 7e-25 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 162507 GGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAA 162566 ||||| || || ||||| ||||| || || || || ||| || ||| | ||||||||| Sbjct 18 GGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCAGAA 77 Query 162567 GATCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCA 162626 |||||||| ||||| || |||||||| || || ||||| | || ||||| | ||||| Sbjct 78 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 137 Query 162627 TGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCT 162686 ||| | || || || || || ||||| ||| |||| ||||| || || ||||| || Sbjct 138 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 197 Query 162687 AGAGGCAACGCCCTTTAAT 162705 | || ||||| ||||||| Sbjct 198 CGTGGAAACGCTCTTTAAT 216 >seq67767 Length=213 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 161943 GATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCATGGTGCC 162002 ||||| ||| ||| ||| | || || || |||| |||||| || || || ||||| Sbjct 3 GATTTTACCCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCT 62 Query 162003 TTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCACGTCTTATTGGTATCCGT 162062 |||| |||| || || ||| | ||||| |||||||| || || | || | || Sbjct 63 TTCGGATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGG 122 Query 162063 CCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATC 162122 || || ||||| || || ||||| ||||| |||||||||||||| |||||||| || Sbjct 123 CCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTGATT 182 Query 162123 TACCCATTGGGTCAGTCCAGTTGGTTTTT 162151 || ||| |||| ||||| ||||||| || Sbjct 183 TATCCACTGGGCCAGTCTGGTTGGTTCTT 211 >seq47049 Length=776 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 161141 GCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGTGCTTGCTCTTCCTGT 161200 || ||||| | ||| ||||| | || || || | |||||| |||| ||||| ||| Sbjct 452 GCTGAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATGT 393 Query 161201 GCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCCTTCTTGGATGATGAC 161260 || |||||| || || ||| ||| || || ||||| || ||| | ||||||||| Sbjct 392 GCTGGTAAAGTTGTTGGTGGTGAAGTTGATCAATCTGATGGTTCTTTCCTTGATGATGAC 333 Query 161261 CAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTA 161303 ||||||||| ||| || || | || |||||||| ||||||| Sbjct 332 CAGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCCTA 290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558981849885800