Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq63568 533 2e-146 seq65592 134 2e-26 seq67767 116 5e-21 seq70055 95.1 1e-14 seq47049 89.7 6e-13 >seq63568 Length=1222 Score = 533 bits (590), Expect = 2e-146 Identities = 697/962 (72%), Gaps = 2/962 (0%) Strand=Plus/Minus Query 181008 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 181067 ||||| || || | || ||||| || || ||||||| || || | ||| | |||||| Sbjct 1056 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 997 Query 181068 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 181126 ||||| || || |||| ||| | ||||| || || || || || || || || ||||| Sbjct 996 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 938 Query 181127 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATC 181186 || || |||| || || | || || ||||| || || |||||||| || |||| | Sbjct 937 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 878 Query 181187 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 181246 ||| || || ||| | ||||| || || || |||||||| ||||| ||||||| || Sbjct 877 TTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAATG 818 Query 181247 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATTTATGC 181306 | | || || |||||||||| |||| | || | |||||| | | || | | Sbjct 817 GTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 758 Query 181307 ATACATGGGACGTGAATGGGAACTCTCTTACCGCTTAGGTATGCGCCCCTGGATCTGTGT 181366 |||||||| ||||| |||||||| || || | ||||||||||| ||||| ||| Sbjct 757 TTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCTGT 698 Query 181367 TGCATACTCTGCTCCAGTCGCAGCAGCATCTGCTGTATTCCTAGTCTATCCTTTCGGTCA 181426 |||||| || ||||| |||||||| || |||| || ||| | |||| || | ||||| Sbjct 697 TGCATATTCAGCTCCCGTCGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGTCA 638 Query 181427 AGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGT 181486 ||| || || || | ||||| || || ||||||||||| ||||||| ||| |||| Sbjct 637 AGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGT 578 Query 181487 TTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGT 181546 || || || ||||| || ||||| ||||| || || |||||||| ||||| || ||||| Sbjct 577 ATTTCAGGCTGAGCATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 518 Query 181547 ATTTGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCG 181606 ||| || || || || |||||||| ||||||||||| ||||| || ||| | || | Sbjct 517 ATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCAG 458 Query 181607 TGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGAC 181666 || || || |||| ||| || || | ||||||| ||||| ||||| ||||| || Sbjct 457 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 398 Query 181667 ATACAACATCGTCGCCGCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATT 181726 || || || || || || |||||||| ||||| || |||||||||||||||||| || Sbjct 397 CTATAATATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 338 Query 181727 CAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTT 181786 |||||| || || || | || |||||||| || || ||||||||||| || |||||||| Sbjct 337 CAACAATTCTCGCTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTT 278 Query 181787 CACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTC 181846 ||||| | || | ||||| ||||| || || | ||||| ||||| || ||||| || Sbjct 277 TACCGCGTTAGGTATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAACCAATC 218 Query 181847 TATCCTCGACGGACAAGGACGTGTCCTCAACACCTGGGCAGACGTGCTCAACCGTGCCGG 181906 | | | || | ||||| ||||| | || |||||||| || | | |||||||| Sbjct 217 TGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAA 158 Query 181907 TCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGCAGC 181966 || || |||||||| ||||| || || || || || || ||||| || || || || || Sbjct 157 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGCTGC 98 Query 181967 AG 181968 || Sbjct 97 AG 96 >seq65592 Length=292 Score = 134 bits (148), Expect = 2e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 183180 GGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAA 183239 || || || || || || ||||| ||||| ||||| |||||| || | ||||||||| Sbjct 18 GGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCAGAA 77 Query 183240 GATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTGCT 183299 |||||||| || ||||| |||||||| || || || || | || ||||| | ||||| Sbjct 78 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 137 Query 183300 TGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTACCT 183359 ||| |||| || ||||| || ||||||||| | || |||||||| || |||||||| Sbjct 138 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 197 Query 183360 AGAGGTAACGCACT 183373 | || ||||| || Sbjct 198 CGTGGAAACGCTCT 211 >seq67767 Length=213 Score = 116 bits (128), Expect = 5e-21 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 182625 CGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTC 182684 || ||||| ||| | || || || |||| ||| || ||||| |||||||| |||| | Sbjct 12 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCTTTCGGATTA 71 Query 182685 ATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCG-CCTGATTGGAATCAGACCTTACAA 182743 || ||||| ||| | | ||||||||||||||||| ||| || | | | ||||| || Sbjct 72 ATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTG-TTCAATTGCGGCCTTATAA 130 Query 182744 TGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTCCTCATCTATCCTTT 182803 ||| || || || || ||||| |||||||| || || ||| ||||| || ||||| | Sbjct 131 TGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTGATTTATCCACT 190 Query 182804 GGGACAGTCCTCTTGGTTTTT 182824 ||| ||||| |||||| || Sbjct 191 GGGCCAGTCTGGTTGGTTCTT 211 >seq70055 Length=284 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 |||| |||||| | |||| || ||||| |||||||||||||| || || | || Sbjct 232 TGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTGGGTTGGTCCGGTCTATTGCTCT 173 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| || ||| ||||| | || |||||| | || || || | ||||| || | Sbjct 172 TTCCTTGCGCCTATTTTGCCGTGGGGGGTTGGTTCACAGGTACCACCTTTGTAACTTCAT 113 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 182550 |||| || || || | || ||||||| | |||||| |||||| | || ||||| | Sbjct 112 GGTATACTCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTAACTGCAGCAG 53 Query 182551 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 182602 |||| || |||||| || | | | || ||| | | |||| |||||||| Sbjct 52 TCTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGTCC 1 >seq47049 Length=776 Score = 89.7 bits (98), Expect = 6e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 179470 GATGATCAGTATATCCTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTTGT 179529 |||||| || || |||||| ||||||||||| || | ||| || |||||| || Sbjct 476 GATGATGTTTACATTCTTGACCATGCTGAAGAAGTTGGAATTGATCTCCCTTACTCATGC 417 Query 179530 CGTGCTGGTGCTTGTTCATCTTGTGCTGGTAAATTAGAGAGTGGATCTGTTGATCAAAGC 179589 | |||||| ||||||| || |||||||||||| | | |||| ||||||||| Sbjct 416 AGAGCTGGTTCTTGTTCTTCATGTGCTGGTAAAGTTGTTGGTGGTGAAGTTGATCAATCT 357 Query 179590 GATCAATCGTTTTTGGATGACGATCAAATGGAGTCGGGATTTATTCTGACTTGCGTATCT 179649 ||| || || | ||||| || || || || || ||| |||| ||||| || || Sbjct 356 GATGGTTCTTTCCTTGATGATGACCAGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCT 297 Query 179650 TATCCTA 179656 ||||||| Sbjct 296 TATCCTA 290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614044015807520