Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq63568 527 7e-145 seq65592 129 6e-25 >seq63568 Length=1222 Score = 527 bits (584), Expect = 7e-145 Identities = 699/963 (73%), Gaps = 8/963 (1%) Strand=Plus/Minus Query 158406 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 158465 ||||| || || | || ||||| || || ||||||| || || | ||| | ||||| Sbjct 1056 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 997 Query 158466 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 158524 ||||| || || |||| ||| | ||||| || || || || || || || || ||||| Sbjct 996 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 938 Query 158525 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATC 158584 || || |||| || || | || || ||||| || || |||||||| || | || | Sbjct 937 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 878 Query 158585 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 158644 ||| || || ||| | ||||| || || || |||||||| ||||| ||||||| || Sbjct 877 TTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAATG 818 Query 158645 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGC 158704 | | || || |||||||||| |||| | || | |||||| | | || | | Sbjct 817 GTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 758 Query 158705 ATATATGGGACGTGAATGGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGT 158764 || ||||| ||||| ||||||||| | || | ||||||||||| ||||| ||| Sbjct 757 TTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCTGT 698 Query 158765 AGCATATTCTGCACCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCA 158824 |||||||| || || ||||| || || |||| || ||| | |||| || | ||||| Sbjct 697 TGCATATTCAGCTCCCGTCGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGTCA 638 Query 158825 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 158884 ||| || || |||| ||||||||| || |||||||||||||| |||| ||| |||| Sbjct 637 AGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGT 578 Query 158885 ATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGT 158944 ||| || || || || || || ||||||||||| || || ||| | ||||| ||||| || Sbjct 577 ATTTCAGGCTGAGCATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 518 Query 158945 ATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTC- 159003 |||||| || || || ||| ||||||||| || | || ||||| | | | || Sbjct 517 ATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTTC-TAGTTTGATCA 459 Query 159004 GTGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAA 159063 | ||||| || |||| || || || | ||||||| ||||| ||||| ||||||| Sbjct 458 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAA 399 Query 159064 CATATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCAT 159123 | |||||||| || || || || ||||| || || || |||||||||||||| ||| | Sbjct 398 CCTATAATATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 339 Query 159124 TCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGT 159183 ||||||| || || || || || |||||||| ||||| |||||||| || || ||||||| Sbjct 338 TCAACAATTCTCGCTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGT 279 Query 159184 TCACCGCCCTTGGCGTGTCA--ACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCA 159241 | ||||| | || | ||| || ||||| ||||| | || |||||||| || ||||| Sbjct 278 TTACCGCGTTAGG--TATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAACCA 221 Query 159242 GTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGTGC 159301 || | ||||| |||| |||||||| | || |||||||| ||| | | |||||||| Sbjct 220 ATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGC 161 Query 159302 AGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGC 159361 || |||||||||||||||||||| ||||| || || || ||||| || ||||| || Sbjct 160 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGC 101 Query 159362 TGC 159364 ||| Sbjct 100 TGC 98 >seq65592 Length=292 Score = 129 bits (142), Expect = 6e-25 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 160718 GGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAGAA 160777 ||||| || || || || ||||| || || || || |||||| || | ||||||||| Sbjct 18 GGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCAGAA 77 Query 160778 GATCCAGAATTTGAGACCTTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTGCA 160837 ||||| ||||||||||| ||||||||||| || || || | || ||||| | ||||| Sbjct 78 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 137 Query 160838 TGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCT 160897 ||| | || || || || || ||||| ||| |||| ||||| || || ||||| || Sbjct 138 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 197 Query 160898 AGAGGCAACGCCCTTTAAT 160916 | || ||||| ||||||| Sbjct 198 CGTGGAAACGCTCTTTAAT 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551958010918720