Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq63568 556 2e-153 seq65592 147 3e-30 seq67767 134 2e-26 seq47049 104 3e-17 >seq63568 Length=1222 Score = 556 bits (616), Expect = 2e-153 Identities = 733/1009 (73%), Gaps = 8/1009 (1%) Strand=Plus/Minus Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920 ||||| | ||| |||| ||| | || ||| | || |||| ||||| ||||| || Sbjct 1083 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1024 Query 178921 ATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 178979 ||||| ||||| || | | |||||| ||||| || || | |||||| | || || || Sbjct 1023 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCC 965 Query 178980 TCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAA 179039 ||| || |||||||| || || ||||| || || |||| || || | || |||||||| Sbjct 964 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAA 905 Query 179040 CATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCAT 179099 || || |||||||| || | || | ||| || || ||| | ||||| ||||| || Sbjct 904 TATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGAT 845 Query 179100 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGT 179159 |||||||| ||||| | ||||| ||| | || || |||||||||| |||| | || Sbjct 844 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 785 Query 179160 CTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 179219 | |||||| | | || | | || ||||| ||||||||||||||| || || Sbjct 784 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCG 725 Query 179220 TCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGC 179279 ||| |||||||| || ||||| ||||||||| || || || ||||| ||||| | ||| Sbjct 724 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCCGTCGCAGCTGCTACTGC 665 Query 179280 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTAT 179339 ||| ||| | |||| || | |||||||| || || |||| ||||||||| || || Sbjct 664 AGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAAT 605 Query 179340 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 179399 |||||||||||| |||| ||| ||||||| || || || || || || ||||||||||| Sbjct 604 CTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCACCC 545 Query 179400 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 179459 || || ||| | ||||| ||||| |||||||| || || || ||| |||||||||||| Sbjct 544 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGG 485 Query 179460 AAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAGACAGAGTCACAGAACTATG 179518 | || ||||| | | ||| || | ||||| || || | || || || | | Sbjct 484 TTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 426 Query 179519 GTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCG 179578 |||| | ||||| ||||| ||||| |||||||| || || || || || || || || | Sbjct 425 GTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCACGGTTATTTTG 366 Query 179579 GTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTG 179638 | || ||||||||||||||||| || ||||| || |||||||| || |||||||| | Sbjct 365 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGCTCTTTACATTTCTTCCTAG 306 Query 179639 CTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCA--ACCATGGCGTT 179696 |||| ||||| || || || |||||||| || || | || | ||| || ||||| || Sbjct 305 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGG--TATCAGCACTATGGCTTT 248 Query 179697 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAA 179756 ||| | || |||||||| || ||||| || | |||| ||||||| ||||| |||| Sbjct 247 CAATTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAA 188 Query 179757 CACATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAA 179816 || ||||| || | | |||||||| | |||||||||||||||||||| ||||| Sbjct 187 TACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 128 Query 179817 CGCACACAACTTCCCACTCGACCTTGCTGCTGCTGAGTCTACACCTGTA 179865 || || || ||||| || ||||| ||||| | ||| || || || || Sbjct 127 TGCTCATAATTTCCCTCTAGACCTAGCTGCAGTCGAGGCTCCATCTATA 79 >seq65592 Length=292 Score = 147 bits (162), Expect = 3e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 180840 GGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAA 180899 ||||| || || ||||| ||||| || || || || |||||| ||| | ||||||||| Sbjct 18 GGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCAGAA 77 Query 180900 GATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGACTACGTGCA 180959 |||||||| || ||||| ||||||||||| || || || || || ||||| | ||||| Sbjct 78 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 137 Query 180960 TGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCA 181019 ||| |||| || ||||| || || |||||| | || |||||||| || ||||||||| Sbjct 138 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 197 Query 181020 AGAGGTAACGC 181030 | || ||||| Sbjct 198 CGTGGAAACGC 208 >seq67767 Length=213 Score = 134 bits (148), Expect = 2e-26 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 180285 CGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTA 180344 || ||||| ||| | || || || |||| ||| || ||||| |||||||| |||| || Sbjct 12 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCTTTCGGATTA 71 Query 180345 ATTGGATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAAT 180404 || || |||||| |||| || |||||||| || || | || | || ||||| ||| Sbjct 72 ATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGGCCTTATAAT 131 Query 180405 GCTATTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTG 180464 || || |||||||| ||||| || ||||| ||||| || || || || || |||||| Sbjct 132 GCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTGATTTATCCACTG 191 Query 180465 GGTCAGTCCAGTTGGTTCTTTG 180486 || ||||| |||||||||||| Sbjct 192 GGCCAGTCTGGTTGGTTCTTTG 213 >seq47049 Length=776 Score = 104 bits (114), Expect = 3e-17 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 177348 CCAGATGGAACTGAAGAGTCCTTCCCTTGTGAAGACGATCAGTACATCCTCGACGCCGCT 177407 |||||||||||| |||||| | ||| ||| ||| ||||| || ||| ||| Sbjct 506 CCAGATGGAACTCAAGAGT---TTGAATGTCCAGATGATGTTTACATTCTTGACCATGCT 450 Query 177408 GAAGAAGCAGGTGTTGATATTAATTACTCATGCCGCGCTGGTGCTTGTTCATCCTGTGCT 177467 ||||||| || ||||| | |||||||||| | |||||| ||||||| || |||||| Sbjct 449 GAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATGTGCT 390 Query 177468 GGTAAACTTGAGAGTGGTAGTGTAGATCAAAGCGATCAATCGTTCTTGGATGACGATCAA 177527 |||||| ||| ||||| || |||||| ||| || ||| | ||||| || || Sbjct 389 GGTAAAGTTGTTGGTGGTGAAGTTGATCAATCTGATGGTTCTTTCCTTGATGATGACCAG 330 Query 177528 ATGGAGTCAGGATTTATTCTGACCTGTGTGTCATATCC 177565 || || || ||| |||| || ||||| | ||||| Sbjct 329 ATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCC 292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 609760017529920