Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq23695 91.5 3e-13 >seq23695 Length=3319 Score = 91.5 bits (100), Expect = 3e-13 Identities = 189/276 (68%), Gaps = 8/276 (3%) Strand=Plus/Plus Query 332025 AAACGACGAGTTAATGCACTATCTTTCTCGATATTTTTACGATATTCATCATATGTTGTT 332084 |||||||| || ||| ||||||||||||| || |||||||||||| |||||| Sbjct 1945 AAACGACGTTCTAGTGCTGGGTCTTTCTCGATATACTTCCGATATTCATCAAGTGTTGTC 2004 Query 332085 GCACCAATTACA-CGAATCTCACCACGTGAAAGTGCTGGCTTAAGCATATTGCTCATGTC 332143 ||||||| |||| |||| ||| || | ||| ||||| | | || | | || Sbjct 2005 GCACCAA-TACACCGAAGCTCTCCTCTACCAAGCATAGGCTTTAAGAGGTTACCCGCATC 2063 Query 332144 CATAGAACCATTACTTGCGGAACCAGCCCCAACCATAATATGAATTTCATCAATGAAAAC 332203 ||||| |||| ||| | ||| || ||||| | ||||||| ||||||||||||| Sbjct 2064 CATAGCTCCAT---TTGTAGCACCTGCTCCAACAACTGTATGAATCTCATCAATGAAAAG 2120 Query 332204 AATAGTATTTTCA--CGTTTCT-TTAGTTCTTTTAGCAAATTGTCGATGCGTTCTTCAAA 332260 ||||| | || | |||| ||| |||||| || | | | | | ||||| || Sbjct 2121 GATAGTTTGACCATCAGATTCTGTTACTTCTTTAAGAACAGCTTTCAGCCTATCTTCGAA 2180 Query 332261 TTCACCACGATACTTAGTACCAGCAGTCAATGCACC 332296 ||| || || || || | |||||| | | |||||| Sbjct 2181 TTCTCCCCGGTATTTTGCTCCAGCAATAAGTGCACC 2216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1112764944994632