Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq56144 120 3e-22 seq53415 105 6e-18 seq56145 102 7e-17 seq33732 100 2e-16 seq56143 98.7 8e-16 seq2804 89.7 4e-13 seq2799 89.7 4e-13 seq2805 86.0 5e-12 seq17518 82.4 6e-11 seq17517 82.4 6e-11 >seq56144 Length=1637 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||| | || | ||||| || | ||| || || || || || ||||||||| Sbjct 978 TGCCGCCGCGGAGACGGAGTACCAGGTGGAGCGTTGATTCCTTCTGTATGTTGTAGTCGG 1037 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | || ||||||| | |||||| ||||| | || | ||||| ||||| || | Sbjct 1038 CTAGGGTTCGGCCGTCTTCCAACTGTTTTCCGGCAAAGATCAACCGCTGCTGATCGGGAG 1097 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || ||||| ||||| | | || | ||||| | || ||||| Sbjct 1098 GAATTCCCTCCTTGTCTTGAATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGGATTCAA 1157 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| ||||| | ||| || || || |||||||||||||||||||| Sbjct 1158 CCTCTAGGGTTATGGTTTTACCGGTTAGGGTTTTCACAAAGATTTGCAT 1206 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| |||| || | |||||||| | ||||| ||||| || ||||| || || | | Sbjct 752 CCTCCACGCAGGCGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATC-CGC 810 Query 27081 ATGT-TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | | | | |||| || || || || || || | || | |||||||||||||| || Sbjct 811 AAGAGTTCTCCCGTCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGG 870 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || ||||| || |||||| |||| | | || | ||||| | || |||||| Sbjct 871 AATTCCTTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAAC 930 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||| || || || |||||||| ||||||||||| Sbjct 931 CTCCAGTGTGATGGTTTTTCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 >seq53415 Length=940 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||| | || | || | ||| | || || || || || || ||||||||| Sbjct 382 GCCACCGCGGAGACGGAGGACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGC 323 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| ||||||| | ||| || |||||| | ||||||||||| ||||| || || Sbjct 322 GAGAGTGCGGCCGTCTTCCAACTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGGAGG 263 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||||| | || | | | || | ||||| | | ||||| Sbjct 262 AATCCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTCGGAAGACTCAAC 203 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || ||||| | || ||||| || |||||||| ||||| ||||| Sbjct 202 CTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 155 >seq56145 Length=1576 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| |||| || | |||||||| | ||||| ||||| || ||||| || || | | Sbjct 752 CCTCCACGCAGGCGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATC-CGC 810 Query 27081 ATGT-TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | | | | |||| || || || || || || | || | |||||||||||||| || Sbjct 811 AAGAGTTCTCCCGTCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGG 870 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || ||||| || |||||| |||| | | || | ||||| | || |||||| Sbjct 871 AATTCCTTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAAC 930 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||| || || || |||||||| ||||||||||| Sbjct 931 CTCCAGTGTGATGGTTTTTCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 >seq33732 Length=802 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCAT-GTTGCGCTC 27091 ||||| || | ||| | || || ||||| || || ||||| ||| || ||| || | Sbjct 693 CGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGC-C 635 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 |||||||||||||| || || | ||||| | |||||| ||||| || | |||||||| Sbjct 634 ATCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCCGGTGGAATGCCCTCTTT 575 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || ||||||| || | | |||| ||||||| || || ||||| || || Sbjct 574 GTCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCTGAACTCTCCACCTCTAGTGTAAT 515 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || || || ||||| ||||||||||||||| Sbjct 514 GGTCTTTCCTGTAAGGGTTTTGACAAAGATTTGCATA 478 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 || ||||| | || || || || || || ||||| || | | | ||| | || || Sbjct 459 ACTAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCAAGGGTACGCCCATCCTCT 400 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || || ||||| || ||||||||||||| ||||| || || | ||||| || || Sbjct 399 AGTTGCTTACCAGCAAAAATGAGACGCTGCTGATCTGGAGGGATCCCCTCCTTGTCTTGA 340 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | |||| || |||| |||||||| ||||| || | ||| Sbjct 339 ATCTTGGACTTAACATTGTCTATGGTATCTGAACTCTCAACTTCAAGAGTGATGGTCTTG 280 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || ||||||||||||||||| Sbjct 279 CCAGTCAGGGTCTTCACAAAGATTTGCAT 251 >seq56143 Length=1408 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| |||| || | |||||||| | ||||| ||||| || ||||| || || | | Sbjct 752 CCTCCACGCAGGCGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATC-CGC 810 Query 27081 ATGT-TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | | | | |||| || || || || || || | || | |||||||||||||| || Sbjct 811 AAGAGTTCTCCCGTCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGG 870 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || ||||| || |||||| |||| | | || | ||||| | || |||||| Sbjct 871 AATTCCTTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAAC 930 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||| || || || ||||| || ||||||||||| Sbjct 931 CTCCAGTGTGATGGTTTTTCCAGTTAGCGTTTTGACGAAGATTTGCAT 978 >seq2804 Length=712 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTC 27091 ||||| || | ||| | || || ||||| ||||| ||||| || ||| | ||| || | Sbjct 699 CGCAACACAAGATGGAGAGTTGACTCTTTCTGAATGTTGTAATCTGCTAAAGTTCTGC-C 641 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 || || |||||||| || || | || || | |||||| || || || | |||||||| Sbjct 640 ATCCTCAAGCTGTTTGCCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCTTT 581 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 ||| |||||| ||| | | || | || || | | || || || || || || Sbjct 580 ATCCTGAATCTTGGCTTTGACATTGTCAATGGTATCAGAGCTCTCGACCTCAAGGGTGAT 521 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || ||||||||||||||||||||||| Sbjct 520 GGTCTTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 485 >seq2799 Length=391 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| || | || | ||| | || || || || |||||||| || ||| | Sbjct 294 CCTCCCCTCAAACGTAGGACAAGATGAAGGGTGGATTCCTTCTGAATATTATAATCGGCC 235 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | |||||||||||||| || || | || || | ||| |||||||| || Sbjct 234 AGAGTTCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGTGGG 175 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||||||| || |||||| |||| | || | ||||| | ||||| Sbjct 174 ATACCCTCTTTGTCTTGTATCTTGGCCTTCACATTGTCAATTGTGTCAGAACTCTCAACC 115 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || || |||||||| |||||||| || ||||| Sbjct 114 TCAAGGGTGATGGTCTTTCCTGTCAGAGTCTTCACAAATATCTGCAT 68 >seq2805 Length=580 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCAT-GTTGCGCTC 27091 ||||| || | ||| | || || ||||| || || ||||| ||| || ||| || | Sbjct 471 CGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGC-C 413 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 |||||||||||||| || || | ||||| | ||||||||| ||||| | || || || Sbjct 412 ATCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGATCGGGCGGGATCCCTTCCTT 353 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || |||||| || | | |||| || |||| |||||||| ||||| || Sbjct 352 GTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGAT 293 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || || || || || || |||||||| Sbjct 292 GGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCAT 257 >seq17518 Length=2997 Score = 82.4 bits (90), Expect = 6e-11 Identities = 193/291 (66%), Gaps = 3/291 (1%) Strand=Plus/Minus Query 131647 AACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTT 131706 ||||| | |||||| | ||| |||||||| | || || || | ||||| ||| | Sbjct 1295 AACTCTTTCCATAAAAAGATCAGGCACCCAAAGGGCATAAAATAAATCTCGAGCACGCTG 1236 Query 131707 CTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGG 131766 ||||| | || || ||||||| | || || || || | || |||||||| || Sbjct 1235 TTCTTCCTTTCCGTGGTTTATTTTCAACTCCAAGAATTCAAATACATCAGCATGCCATGG 1176 Query 131767 TTCCAAATACACTGCCATTGCGCCTTTGCGCTTACCGCCT---TGATTAACATGACGAAC 131823 |||||| || || || | || ||||| | ||| || ||| |||| ||||| || | Sbjct 1175 TTCCAAGTATACAGCAAAAGCACCTTTTCTCTTGCCTCCTCCCTGATCAACATATCGGGC 1116 Query 131824 CATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTT 131883 ||| ||| | || |||| ||| || | ||| || | | ||||| || | Sbjct 1115 AGTGTCATTGAACACACGCAGCATTGGAATGATACCATTAGACGTCCCATTTGTTCCACG 1056 Query 131884 AATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC 131934 |||||||||||||| || || || || ||||| | ||||| ||||| Sbjct 1055 AATGTAGCTGCCATATGCCCTTATGTTATGAACAGAAACACCAATCCCTCC 1005 >seq17517 Length=2996 Score = 82.4 bits (90), Expect = 6e-11 Identities = 193/291 (66%), Gaps = 3/291 (1%) Strand=Plus/Minus Query 131647 AACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTT 131706 ||||| | |||||| | ||| |||||||| | || || || | ||||| ||| | Sbjct 1294 AACTCTTTCCATAAAAAGATCAGGCACCCAAAGGGCATAAAATAAATCTCGAGCACGCTG 1235 Query 131707 CTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGG 131766 ||||| | || || ||||||| | || || || || | || |||||||| || Sbjct 1234 TTCTTCCTTTCCGTGGTTTATTTTCAACTCCAAGAATTCAAATACATCAGCATGCCATGG 1175 Query 131767 TTCCAAATACACTGCCATTGCGCCTTTGCGCTTACCGCCT---TGATTAACATGACGAAC 131823 |||||| || || || | || ||||| | ||| || ||| |||| ||||| || | Sbjct 1174 TTCCAAGTATACAGCAAAAGCACCTTTTCTCTTGCCTCCTCCCTGATCAACATATCGGGC 1115 Query 131824 CATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTT 131883 ||| ||| | || |||| ||| || | ||| || | | ||||| || | Sbjct 1114 AGTGTCATTGAACACACGCAGCATTGGAATGATACCATTAGACGTCCCATTTGTTCCACG 1055 Query 131884 AATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC 131934 |||||||||||||| || || || || ||||| | ||||| ||||| Sbjct 1054 AATGTAGCTGCCATATGCCCTTATGTTATGAACAGAAACACCAATCCCTCC 1004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424547749400808