Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq25475 87.8 2e-12 >seq25475 Length=2349 Score = 87.8 bits (96), Expect = 2e-12 Identities = 285/430 (66%), Gaps = 16/430 (4%) Strand=Plus/Plus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || || ||||| | | || ||||| | || || || || | ||| || || |||||| Sbjct 1575 TCGTTTGAAAAAGTTAATCCTGGCATTAAACCGCGTTTTTTGAGCCAGAAAATCGCACAG 1634 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 || ||| || || || ||||| || || ||||| || |||| | | ||||| Sbjct 1635 AAACTACCTGAAAAAAATATACCTTCAACGCAAGCAAATGCTACAATCCTCTCAGCGAA- 1693 Query 74910 GGTGCATCGGAAG--TC-ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTG-ACCGCAGG 74965 || ||| || | || ||||| || |||||||| || ||| || | | || | Sbjct 1694 --TGTATCAGACGAATCGATCCATTTCATCGCCCATTCCGCCTTT--TTCGCAATACATG 1749 Query 74966 GACA-GTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGT 75024 || || || ||||| || || | | ||||||| | | ||| |||| | | Sbjct 1750 GAATCGTCTCAATCGCGTGAAACAAACGATTCTTCTCTGCTGAATCTTTGATATACGCCT 1809 Query 75025 CAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCG-TTGAACGA-CTGGTACGCGTA 75082 | | | ||| || ||| |||| ||||| || |||| ||| ||| |||| | |||| Sbjct 1810 CGAGGAGAAGAGAATACATCTCTGAATGGATATTCTCGATTG--CGATCTGGAATCCGTA 1867 Query 75083 GAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAAT-TCATGTCGATATTCTCCA 75141 ||| | |||||||||| || || | || ||| | ||| | | ||| |||||||| Sbjct 1868 GAAGGCACGCGCCTCTGAGATTTGGATTTC-TTTCATGAATCTTCCGGCGAGATTCTCCA 1926 Query 75142 TGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCAT 75201 |||||| ||||| |||||||| || || || || || | ||||||||||||| Sbjct 1927 AGACGATTCCGTCGGAGGCGGCAAAGAAGGCAAGGACATGCGAAACAAAGTGGCGCTCAC 1986 Query 75202 CGTCAGTGAG 75211 |||| ||||| Sbjct 1987 CGTCGGTGAG 1996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546705317508200