Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20]
74,659 sequences; 80,362,707 total letters
Query= NC_028238.1
Length=188534
Score E
Sequences producing significant alignments: (Bits) Value
seq15741 84.2 3e-11
seq15740 84.2 3e-11
seq15739 84.2 3e-11
seq15738 84.2 3e-11
>seq15741
Length=1262
Score = 84.2 bits (92), Expect = 3e-11
Identities = 160/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 89169 GACGAATGGTTTACATGGAAAGAATTATTCGATCCTGTCTTGCATATAGAACTTAGGAGG 89228
|| ||||||| || ||||| || || |||| || | || || || ||| | |
Sbjct 706 GATGAATGGTCTAGTTGGAAGAAACTAGGCGATAGCGTGCTTCACATTGAGCTTCGCAAA 647
Query 89229 TGGGCTGATATATTTATTATCGCGCCACTAACGGCTAATACTCTAGCGAAGATAGCTAAT 89288
||||||||||| | | || || ||| || |||| || ||||| | ||||| |||
Sbjct 646 TGGGCTGATATCATGGTCATTGCTCCATTATCGGCAAACACTCTTGGCAAGATTGCTGGA 587
Query 89289 GGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGGGA-TATATCAAAGCCCCT 89347
|| | || ||||| |||| || | ||| || || || ||||| || | ||| || |
Sbjct 586 GGGTTGTGTGACAATCTACTGACATGTATTGTGAGAGCCTGGGACTACAGCAA--GCCAT 529
Query 89348 TATTTTTTG-TCCTGCCATGAATACTCTAATGTGGGAACATCCTATTACTGA 89398
||||| ||| ||||||||||| ||| | |||||| | ||||| | || ||
Sbjct 528 TATTTGTTGCACCTGCCATGAACACTTTTATGTGGAACAATCCTTTCACAGA 477
>seq15740
Length=1172
Score = 84.2 bits (92), Expect = 3e-11
Identities = 160/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 89169 GACGAATGGTTTACATGGAAAGAATTATTCGATCCTGTCTTGCATATAGAACTTAGGAGG 89228
|| ||||||| || ||||| || || |||| || | || || || ||| | |
Sbjct 706 GATGAATGGTCTAGTTGGAAGAAACTAGGCGATAGCGTGCTTCACATTGAGCTTCGCAAA 647
Query 89229 TGGGCTGATATATTTATTATCGCGCCACTAACGGCTAATACTCTAGCGAAGATAGCTAAT 89288
||||||||||| | | || || ||| || |||| || ||||| | ||||| |||
Sbjct 646 TGGGCTGATATCATGGTCATTGCTCCATTATCGGCAAACACTCTTGGCAAGATTGCTGGA 587
Query 89289 GGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGGGA-TATATCAAAGCCCCT 89347
|| | || ||||| |||| || | ||| || || || ||||| || | ||| || |
Sbjct 586 GGGTTGTGTGACAATCTACTGACATGTATTGTGAGAGCCTGGGACTACAGCAA--GCCAT 529
Query 89348 TATTTTTTG-TCCTGCCATGAATACTCTAATGTGGGAACATCCTATTACTGA 89398
||||| ||| ||||||||||| ||| | |||||| | ||||| | || ||
Sbjct 528 TATTTGTTGCACCTGCCATGAACACTTTTATGTGGAACAATCCTTTCACAGA 477
>seq15739
Length=1227
Score = 84.2 bits (92), Expect = 3e-11
Identities = 160/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 89169 GACGAATGGTTTACATGGAAAGAATTATTCGATCCTGTCTTGCATATAGAACTTAGGAGG 89228
|| ||||||| || ||||| || || |||| || | || || || ||| | |
Sbjct 706 GATGAATGGTCTAGTTGGAAGAAACTAGGCGATAGCGTGCTTCACATTGAGCTTCGCAAA 647
Query 89229 TGGGCTGATATATTTATTATCGCGCCACTAACGGCTAATACTCTAGCGAAGATAGCTAAT 89288
||||||||||| | | || || ||| || |||| || ||||| | ||||| |||
Sbjct 646 TGGGCTGATATCATGGTCATTGCTCCATTATCGGCAAACACTCTTGGCAAGATTGCTGGA 587
Query 89289 GGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGGGA-TATATCAAAGCCCCT 89347
|| | || ||||| |||| || | ||| || || || ||||| || | ||| || |
Sbjct 586 GGGTTGTGTGACAATCTACTGACATGTATTGTGAGAGCCTGGGACTACAGCAA--GCCAT 529
Query 89348 TATTTTTTG-TCCTGCCATGAATACTCTAATGTGGGAACATCCTATTACTGA 89398
||||| ||| ||||||||||| ||| | |||||| | ||||| | || ||
Sbjct 528 TATTTGTTGCACCTGCCATGAACACTTTTATGTGGAACAATCCTTTCACAGA 477
>seq15738
Length=1310
Score = 84.2 bits (92), Expect = 3e-11
Identities = 160/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 89169 GACGAATGGTTTACATGGAAAGAATTATTCGATCCTGTCTTGCATATAGAACTTAGGAGG 89228
|| ||||||| || ||||| || || |||| || | || || || ||| | |
Sbjct 706 GATGAATGGTCTAGTTGGAAGAAACTAGGCGATAGCGTGCTTCACATTGAGCTTCGCAAA 647
Query 89229 TGGGCTGATATATTTATTATCGCGCCACTAACGGCTAATACTCTAGCGAAGATAGCTAAT 89288
||||||||||| | | || || ||| || |||| || ||||| | ||||| |||
Sbjct 646 TGGGCTGATATCATGGTCATTGCTCCATTATCGGCAAACACTCTTGGCAAGATTGCTGGA 587
Query 89289 GGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGGGA-TATATCAAAGCCCCT 89347
|| | || ||||| |||| || | ||| || || || ||||| || | ||| || |
Sbjct 586 GGGTTGTGTGACAATCTACTGACATGTATTGTGAGAGCCTGGGACTACAGCAA--GCCAT 529
Query 89348 TATTTTTTG-TCCTGCCATGAATACTCTAATGTGGGAACATCCTATTACTGA 89398
||||| ||| ||||||||||| ||| | |||||| | ||||| | || ||
Sbjct 528 TATTTGTTGCACCTGCCATGAACACTTTTATGTGGAACAATCCTTTCACAGA 477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 602617889058160
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |