Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq56144 122 5e-23 seq56145 118 7e-22 seq56143 118 7e-22 seq34025 111 1e-19 seq53415 104 1e-17 seq33732 104 1e-17 seq2804 104 1e-17 seq2801 91.5 9e-14 seq62831 84.2 1e-11 >seq56144 Length=1637 Score = 122 bits (134), Expect = 5e-23 Identities = 169/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | |||| ||||| || ||||| || ||||| || || | Sbjct 979 GCCGCCGCGGAGACGGAGTACCAGGTGGAGCGTTGATTCCTTCTGTATGTTGTAGTCGGC 1038 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || ||||| ||||||| | ||||| |||||||| || || ||||| || || || || Sbjct 1039 TAGGGTTCGGCCGTCTTCCAACTGTTTTCCGGCAAAGATCAACCGCTGCTGATCGGGAGG 1098 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||||| ||| || | ||| ||| | || ||||| | || | Sbjct 1099 AATTCCCTCCTTGTCT-TGAATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGGATTCAA 1157 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 | || | |||||| ||||||||||||| ||||||||||| || |||||| ||| Sbjct 1158 CCTCTAGGGTTATGGTTTTACCGGTTAGGGTTTTCACAAAGATTTGCATGATGA 1211 Score = 118 bits (130), Expect = 7e-22 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| ||||| |||||||| | ||| || || | ||||||||||||||||| ||||| Sbjct 560 TCCTTCTGAATATTATAATCAGCAAGAGTGCGTCCATCTTCAAGTTGTTTACCAGCAAAG 619 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | ||||||||| || || || | || ||||| || ||| || | ||| || | Sbjct 620 ATAAGACGCTGTTGATCAGGTGGTATCCCTTCCTTATC-CTGAATCTTGGCTTTCACATT 678 Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | ||| || || |||||||| |||| || || || ||||| ||||| || || || Sbjct 679 ATCAATAGTATCCGAACTCTCCACCTCCAAAGTAATTGTCTTACCCGTTAAAGTCTTGAC 738 Query 34695 AAAAATCTGCAT 34706 |||||||||||| Sbjct 739 AAAAATCTGCAT 750 Score = 116 bits (128), Expect = 2e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||||||||| ||| || || || |||||||| | ||| |||| | |||| || Sbjct 770 ACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTCC 829 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || || ||||| || || |||||||| ||||| || | ||| || ||||| | Sbjct 830 AGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTGG 889 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || | || ||| | |||||||| | || || |||| || || ||||| Sbjct 890 ATC-TTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||||| |||||||| || || |||||| Sbjct 949 TCCGGTTAGGGTTTTCACGAAGATTTGCATG 979 >seq56145 Length=1576 Score = 118 bits (130), Expect = 7e-22 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| ||||| |||||||| | ||| || || | ||||||||||||||||| ||||| Sbjct 560 TCCTTCTGAATATTATAATCAGCAAGAGTGCGTCCATCTTCAAGTTGTTTACCAGCAAAG 619 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | ||||||||| || || || | || ||||| || ||| || | ||| || | Sbjct 620 ATAAGACGCTGTTGATCAGGTGGTATCCCTTCCTTATC-CTGAATCTTGGCTTTCACATT 678 Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | ||| || || |||||||| |||| || || || ||||| ||||| || || || Sbjct 679 ATCAATAGTATCCGAACTCTCCACCTCCAAAGTAATTGTCTTACCCGTTAAAGTCTTGAC 738 Query 34695 AAAAATCTGCAT 34706 |||||||||||| Sbjct 739 AAAAATCTGCAT 750 Score = 116 bits (128), Expect = 2e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||||||||| ||| || || || |||||||| | ||| |||| | |||| || Sbjct 770 ACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTCC 829 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || || ||||| || || |||||||| ||||| || | ||| || ||||| | Sbjct 830 AGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTGG 889 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || | || ||| | |||||||| | || || |||| || || ||||| Sbjct 890 ATC-TTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||||| |||||||| || || |||||| Sbjct 949 TCCGGTTAGGGTTTTCACGAAGATTTGCATG 979 >seq56143 Length=1408 Score = 118 bits (130), Expect = 7e-22 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| ||||| |||||||| | ||| || || | ||||||||||||||||| ||||| Sbjct 560 TCCTTCTGAATATTATAATCAGCAAGAGTGCGTCCATCTTCAAGTTGTTTACCAGCAAAG 619 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | ||||||||| || || || | || ||||| || ||| || | ||| || | Sbjct 620 ATAAGACGCTGTTGATCAGGTGGTATCCCTTCCTTATC-CTGAATCTTGGCTTTCACATT 678 Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | ||| || || |||||||| |||| || || || ||||| ||||| || || || Sbjct 679 ATCAATAGTATCCGAACTCTCCACCTCCAAAGTAATTGTCTTACCCGTTAAAGTCTTGAC 738 Query 34695 AAAAATCTGCAT 34706 |||||||||||| Sbjct 739 AAAAATCTGCAT 750 Score = 114 bits (126), Expect = 8e-21 Identities = 156/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||||||||| ||| || || || |||||||| | ||| |||| | |||| || Sbjct 770 ACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTCC 829 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || || ||||| || || |||||||| ||||| || | ||| || ||||| | Sbjct 830 AGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTGG 889 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || | || ||| | |||||||| | || || |||| || || ||||| Sbjct 890 ATC-TTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 || |||| |||||| || || || |||||| ||| Sbjct 949 TCCAGTTAGCGTTTTGACGAAGATTTGCATGATGA 983 >seq34025 Length=456 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| |||||||| | |||||| ||| || || || ||||| ||||| | Sbjct 359 CCACCACGAAGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCC 300 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| || ||||| || ||||| || || | ||| || || || || Sbjct 299 AAAGTTCTGCCATCTTCGAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 240 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||||| || ||||| || ||| || ||| |||||| || || || Sbjct 239 ATTCCCTCCTTGTCT-TGTATTTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCTAC 181 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || || ||||| || || ||||| || |||||||| Sbjct 180 CTCTAAGGTAATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 133 >seq53415 Length=940 Score = 104 bits (114), Expect = 1e-17 Identities = 165/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | ||||| | || | ||||||||| |||||| || ||||| || || | Sbjct 383 CGCCACCGCGGAGACGGAGGACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGG 324 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 || || || ||||||| | || || ||||| || || | |||||| || || || | Sbjct 323 CGAGAGTGCGGCCGTCTTCCAACTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGGAG 264 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | |||||||||||| |||| || || || ||| | || ||||| ||| Sbjct 263 GAATCCCCTCCTTGTCTTGGATC-TTGGTCTTGACGTTGTCGATGGTGTCGGAAGACTCA 205 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || || | ||||||||| || || |||| |||||||| || |||||||| ||| Sbjct 204 ACCTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTG 151 >seq33732 Length=802 Score = 104 bits (114), Expect = 1e-17 Identities = 159/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| ||||| || ||| ||||| || ||||| ||||| | ||| || ||| Sbjct 468 AGACGGAGCACTAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCAAGGGTACGC 409 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || ||||| ||||| ||||| || | |||||| || || || || | |||||| Sbjct 408 CCATCCTCTAGTTGCTTACCAGCAAAAATGAGACGCTGCTGATCTGGAGGGATCCCCTCC 349 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| || | ||||| | || || ||| ||||| ||||| | || Sbjct 348 TTGTCT-TGAATCTTGGACTTAACATTGTCTATGGTATCTGAACTCTCAACTTCAAGAGT 290 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 || || || || || | || |||||||| || ||||| |||| Sbjct 289 GATGGTCTTGCCAGTCAGGGTCTTCACAAAGATTTGCATCTTGA 246 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| |||||||| | |||||| ||| || || || ||||| ||||| | Sbjct 705 CCACCACGAAGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCC 646 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| || ||||| || ||||| || | | |||||||||||| || Sbjct 645 AAAGTTCTGCCATCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCCGGTGGA 586 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| ||||| |||| || | || || | || |||||| |||||||| Sbjct 585 ATGCCCTCTTTGTCCTGGATC-TTGGCCTTGACATTGTCTATGGTGTCTGAACTCTCCAC 527 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || || || || | ||||| ||||| || ||||| Sbjct 526 CTCTAGTGTAATGGTCTTTCCTGTAAGGGTTTTGACAAAGATTTGCAT 479 >seq2804 Length=712 Score = 104 bits (114), Expect = 1e-17 Identities = 159/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||||||||| || ||||| || ||||| ||||| | ||| || || Sbjct 474 AGACGGAGCACCAAATGGAGTGTAGATTCCTTCTGTATGTTGTAATCAGCAAGGGTACGG 415 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || |||||||| |||||||| || | |||||| ||||| || || | || ||| Sbjct 414 CCATCCTCTAGTTGTTTGCCGGCAAAAATGAGACGCTGCTGGTCAGGTGGGATCCCTTCC 355 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| || | ||||| | || || ||| ||||| ||||| | || Sbjct 354 TTGTCT-TGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGT 296 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 || || || || || | || || || ||||| ||||| |||| Sbjct 295 GATGGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCATCTTGA 252 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||||||||| | ||||||||| ||| || |||||||| ||||||| Sbjct 711 CCACCACGAAGACGCAACACAAGATGGAGAGTTGACTCTTTCTGAATGTTGTAATCTGCT 652 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | || ||||| ||||| || ||||| || | | ||||||||| || || Sbjct 651 AAAGTTCTGCCATCCTCAAGCTGTTTGCCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGA 592 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| || || ||| || | ||| || | ||| || || |||||| || Sbjct 591 ATGCCCTCTTTATC-CTGAATCTTGGCTTTGACATTGTCAATGGTATCAGAGCTCTCGAC 533 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || || || || | ||||||||||| || ||||| Sbjct 532 CTCAAGGGTGATGGTCTTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 485 >seq2801 Length=469 Score = 91.5 bits (100), Expect = 9e-14 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || |||||| ||||| || ||||| ||||| | ||| || || | ||||| | |||| Sbjct 275 TGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGACCATCTTCCAATTGT 216 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || ||||| || | | || || || || || | || ||||| ||| ||| ||| Sbjct 215 TTCCCAGCAAAGATAAGCCTTTGCTGATCAGGAGGAATACCTTCCTTATCTTGGAT-TTT 157 Query 34624 TGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | ||| ||| | || || || |||||||| || | || || ||||| ||||| Sbjct 156 AGATTTCACGTTGTCTATGGTATCAGAACTCTCCACCTCAAGAGTGATAGTTTTGCCGGT 97 Query 34683 TAACGTTTTCACAAAAATCTGCATGTTGA 34711 || ||||||||||| || ||||| |||| Sbjct 96 CAATGTTTTCACAAAGATTTGCATCTTGA 68 >seq62831 Length=874 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | || ||||| || || || || ||||||||||||||||| | | Sbjct 135 CCTCCTCTGAGCCTCAGGACCAAGTGAAGCGTTGATTCTTTTTGAATGTTATAATCAGCA 76 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || ||||||||||| || || | ||| ||||| || || Sbjct 75 AGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAAATCAACCTCTGCTGGTCAGGAGGG 16 Query 34600 ACTCCCTCCTTGTC 34613 | || |||||||| Sbjct 15 ATACCTTCCTTGTC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314443225471547