Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq63568 535 5e-147 >seq63568 Length=1222 Score = 535 bits (592), Expect = 5e-147 Identities = 692/953 (73%), Gaps = 2/953 (0%) Strand=Plus/Minus Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205 ||||| |||| ||||||||||| | ||||| || | | || || | | ||| Sbjct 1049 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTA 991 Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265 ||||| | || || ||||| || || || || ||||| || |||||||| || || || Sbjct 990 TTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTT 931 Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325 | ||||||||||| || |||||||| || || || || || | | || | || Sbjct 930 TCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCG 871 Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385 || ||||| | ||||| ||||| || |||||||| ||| | ||||| |||||| | ||| Sbjct 870 GCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAATGGTTATAC 811 Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445 ||||| || || || |||| |||| | |||||| | | ||| | | ||||||| Sbjct 810 AATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATG 751 Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505 || || | ||||||||||||| | || || ||||| |||||||| ||||||||| Sbjct 750 GGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATAT 691 Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565 || || || || | || || | ||||||||| | |||| ||| | ||||||||| Sbjct 690 TCAGCTCCCGTCGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGC 631 Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625 || || |||||||||||||| || || || ||||| |||||||||||| ||||||| || Sbjct 630 TTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAG 571 Query 176626 GCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGT 176685 || ||||| || ||||| ||||||||||| || ||| | || ||||| ||||| || || Sbjct 570 GCTGAGCATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGC 511 Query 176686 GGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACA 176745 || || || ||| || |||||||| | || |||||| | | || || || Sbjct 510 GGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACC 451 Query 176746 ACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAAC 176805 || ||||| ||||| || | ||||||| |||||| ||||| ||||| || || || Sbjct 450 ACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAAT 391 Query 176806 ATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAAC 176865 ||||||||||| |||||||| ||||| || | |||||||| |||||| |||||| || Sbjct 390 ATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAAT 331 Query 176866 TCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCA 176925 || | | | || |||||||| || || | || || || | ||||||||||| || Sbjct 330 TCTCGCTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCG 271 Query 176926 ATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTA 176985 | ||| | |||| ||||| ||||| | || |||||||| || ||||| ||||| | Sbjct 270 TTAGGTATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAACCAATCTGTAGTT 211 Query 176986 GACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGT 177045 || | ||| || ||| ||| |||| ||||| |||||||||| ||||||||| Sbjct 210 GATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGT 151 Query 177046 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGC 177098 |||||||||||||| || ||||||||||| || ||||| || ||||| ||||| Sbjct 150 ATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGCTGC 98 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602931196394880