Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_028847.1 Length=170527 Score E Sequences producing significant alignments: (Bits) Value seq22701 82.4 8e-11 >seq22701 Length=2303 Score = 82.4 bits (90), Expect = 8e-11 Identities = 167/239 (70%), Gaps = 18/239 (8%) Strand=Plus/Plus Query 145578 AAATCGCCTGGAATAAGATTACACATCTTAGCTACAAT-ATGCA---CAAGAGCGGCGTA 145633 ||||| ||||||| ||| | ||| | | ||| ||| ||||| |||||||| | || Sbjct 580 AAATCACCTGGAACAAGGTCACAAACATGAGC---AATCATGCATGTCAAGAGCG-CATA 635 Query 145634 AGAGGCGATATTAAATGGCAATCCTAAGAACACGTCAACAGAACGCTGATACCACTGGAG 145693 ||| || |||||||| |||| || | | || ||| |||| || |||||| | | || Sbjct 636 AGATGCAATATTAAACGGCACACCCAGGCCCATGTCGGCAGATCGTTGATAC-ATTTGA- 693 Query 145694 GTCAAGATGAC----CATTACGGACGTTGAACTGGTAAAAACAA-TGGCATGGTGGAAGA 145748 || ||| || |||| || | |||||| | ||||| ||||||||||||||| Sbjct 694 --CACGATAACTCCCCATTTGCCACATAGAACTG-TGCAAACATGTGGCATGGTGGAAGA 750 Query 145749 GCCATCTGGTTAATTTCAGCAGGGTTCCATGCTGATACGATTTGACGACGGTCATTGGG 145807 ||||| |||| |||| || ||||||||||| | ||| || || |||| ||| Sbjct 751 GCCATTAATTTAAGATCAGATGGATTCCATGCTGAGAGGATGATGCGTCGATCATCGGG 809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545049264442680