Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq22701 120 3e-22 >seq22701 Length=2303 Score = 120 bits (132), Expect = 3e-22 Identities = 375/571 (66%), Gaps = 16/571 (3%) Strand=Plus/Plus Query 118489 TAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGA 118548 || ||||| | ||||||||| ||| || || ||||| || ||| | | ||| Sbjct 550 TAAACATGTGTATCCCCAATAACATGGATAAAATCACCTGGAACAAGGTCACAAACATGA 609 Query 118549 GCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATG 118608 ||||||||| ||||||| | || || | |||||| || |||||||| |||||| Sbjct 610 GCAATCATGCATGTCAAGAGCGCATAAGATGCAATATTAAACGGCACACCCAGGCCCATG 669 Query 118609 TCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTGACTT 118668 || || |||| || |||| ||| || || | |||||| ||||| ||||| ||||| Sbjct 670 TCGGCAGATCGTTGATACATTTGACACGATAACTCCCCATTTGCCACATAGAACTGTGCA 729 Query 118669 ATGATGTGACATGGAGGCAGAACCATGGAACTCAGTTGGGCAGGATTCCAGGCTGTTA-A 118727 | ||||| ||||| || ||| |||| | | || | | |||||||| |||| | Sbjct 730 AACATGTGGCATGGTGGAAGAGCCATTAATTTAAGATCAGATGGATTCCATGCTGAGAGG 789 Query 118728 AACATGCCTTCTGCTATATGGTTCTACCTGTATACCCTCAATTAAATTCTGAATCTGATC 118787 | ||| | || || || | || ||| | ||| | || || |||||| Sbjct 790 ATGATG-CGTCGATCATCGGGATTATGCTTTATCTTATTAATAACATCTAAAAGCTGATC 848 Query 118788 CACACCCTTTCCAGTATACTGAGACTC--GCATCCT-TTATATTCTGCCCCAAAAAATCT 118844 | || | || | || | ||| |||| | |||| | ||| ||||| || Sbjct 849 AAATCCTTGGCCGGAGTAGT---CCTCATGCATGTTAGTATACTTTGCACCAAAGTGCCT 905 Query 118845 CCATTGAAAACCATAAACAGGCCCCAGATCTCCCTGGGACCTAAAATCTAAACCTACTTT 118904 ||| ||||| ||||||||||| || | || |||| ||| | ||||| | | Sbjct 906 CCACTGAAACCCATAAACAGGTCCTAAGTCACCCTCCTCCCTTTCTTTCAAACCAA---T 962 Query 118905 TCTCTGAA---ATTCTTTTGACCCATTAGCATTCCAAATAGCAACTCCttttt-ttGCCA 118960 || | || ||||| | || |||| | | ||| ||| || ||||||| || | Sbjct 963 GCTATCAAGGTATTCTCTCGATGCATTTCCGTCCCATATATGAATGCCTTTTTCCTGTAA 1022 Query 118961 GATCATTAGAGTTTGTAGAACCACTTAAAAACCAAAGAAGCTCCTCAACAACGCCTCTCC 119020 | || | | ||||| || ||||| | ||||||||||||||| |||||||| || | || Sbjct 1023 CACCA-TGGCATTTGTTGAGCCACTGATAAACCAAAGAAGCTCTTCAACAACCCCGCGCC 1081 Query 119021 AAAAAACTGTTTTTGTTGTAAACAGTGGAAA 119051 |||| ||| | || ||||| | || ||||| Sbjct 1082 AAAATACTCTCTTAGTTGTTAGAAGCGGAAA 1112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414099664839676